Bioconductor Dna methylation

Showing : dna methylation • reset

votes

1.1k

views

minfi cell proportion estimateCellCounts DNA Methylation

4.9 years ago grayapply2009 • 0

vote

replies

2.4k

views

normalization DNA methylation WGCNA

updated 5.6 years ago by Peter Langfelder ★ 3.0k • written 5.6 years ago by enora.fremy • 0

vote

replies

1.2k

views

medips medip-seq dna methylation dmr analysis

updated 6.2 years ago by Lukas Chavez ▴ 570 • written 6.2 years ago by mtefit • 0

votes

replies

1.9k

views

R gdc rna-seq dna methylation

updated 6.3 years ago by Sean Davis 21k • written 6.3 years ago by RichardJActon ▴ 50

vote

replies

1.5k

views

minfi normalization outliers dna methylation densityplot

6.5 years ago peter.fransquet • 0

votes

replies

897

views

differential variability dna methylation iEVORA DVP

6.8 years ago poojitha.stemcell ▴ 10

votes

replies

1.2k

views

rnbeads methylation methylationepic dna methylation

7.0 years ago gabrielrfries • 0

votes

1.3k

views

dna methylation biseq

updated 7.1 years ago by Gordon Smyth 52k • written 7.1 years ago by ahmad.moousavi • 0

votes

replies

2.1k

views

tcgabiolinks dna methylation

updated 7.2 years ago by Marcel Ramos 700 • written 7.2 years ago by michaelwxf2012 • 0

vote

2.0k

views

dna methylation illimina 450k methylation beta M significance

updated 7.3 years ago by James W. MacDonald 67k • written 7.3 years ago by skids121 • 0

votes

replies

1.4k

views

CNV minfi preprocessing dna methylation

7.9 years ago Thomas • 0

vote

replies

1.2k

views

microarray HM450 dna methylation cohcap

updated 8.0 years ago by James W. MacDonald 67k • written 8.0 years ago by poojitha.stemcell ▴ 10

votes

1.3k

views

minfi bumphunter DNA methylation illumina450k

updated 8.6 years ago by James W. MacDonald 67k • written 8.6 years ago by fleur_p90 • 0

13 results • Page 1 of 1

Recent ...

Replies

Comment: Unused arguments error without used arguments in GSVA? by 1sunmic2 • 0

It was due to the comma. Thank you!

Answer: Unused arguments error without used arguments in GSVA? by Axel Klenk ★ 1.1k

Hi, here is a good place to ask questions when encountering problems with GSVA. I cannot reproduce this behaviour with the current release…

Answer: Restricting differential binding analysis to only TSS-proximal regions by Aaron Lun ★ 28k

Seems reasonable to filter out windows outside of the TSS if you don't care about those events. IIRC the `discard` option will ignore any f…

Comment: Sample-specific methylation values using QSEA by User3088 • 0

Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…

Comment: input for singR function by iamin053 • 0

Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!

Votes

Answer: Unused arguments error without used arguments in GSVA?

Unused arguments error without used arguments in GSVA?

Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte

Awards • All

Teacher to Axel Klenk ★ 1.1k