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Showing :
ebimage
•
reset
0
votes
1
reply
632
views
Using EBI Image on Ranged Bar Chart
EBImage
written 6 months ago by
ekatcher
• 0
2
votes
3
replies
911
views
EBImage Rendering of a DelayedArray Object
DelayedArray
EBImage
cytomapper
updated 6 months ago by
Hervé Pagès
16k • written 16 months ago by
Dario Strbenac
★ 1.6k
1
vote
1
reply
795
views
Otsu threshold segmentation using EBImage
EBImage
updated 17 months ago by
James W. MacDonald
68k • written 17 months ago by
medha.bulusu
• 0
0
votes
2
replies
928
views
EBImage - Selecting parameters for x-ray seed size analysis
EBImage
updated 23 months ago by
Wolfgang Huber
★ 13k • written 23 months ago by
Brian
• 0
0
votes
0
replies
951
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
3.4 years ago
Wolfgang Huber
★ 13k
0
votes
0
replies
751
views
Using EBImage for classifing image in 5 classes
Machine-Learning
Image-Processing
EBImage
updated 3.8 years ago by
shepherl
4.2k • written 3.8 years ago by
smishra0960
• 0
2
votes
6
replies
3.1k
views
Cannot download “EBImage” library in R
R
EBImage
written 5.1 years ago by
Henry1234
• 0
1
vote
3
replies
1.8k
views
Extracting coordinates of points in an image
EBImage
image analysis
5.1 years ago
eran.tauber
• 0
3
votes
2
replies
1.7k
views
EBImage: Annotate multiple images in a grid with display()?
EBImage
display
updated 5.6 years ago by
Andrzej Oleś
▴ 750 • written 5.6 years ago by
maltethodberg
▴ 180
0
votes
3
replies
1.5k
views
Installation path not writable
ebimage
biocmanager
updated 5.8 years ago by
James W. MacDonald
68k • written 5.8 years ago by
jenigabi230399
• 0
1
vote
2
replies
1.7k
views
EBimage fftw issue
EBImage
CentOS
updated 6.8 years ago by
Wolfgang Huber
★ 13k • written 6.8 years ago by
Mathieu Gendarme
▴ 20
0
votes
1
reply
1.2k
views
Best Practices for Speeding Up/Optimizing EBIMage
ebimage
6.9 years ago
grockmore
• 0
3
votes
19
replies
3.6k
views
EBImage computeFeatures error
ebimage
image processing
computefeatures
updated 7.0 years ago by
Mike Smith
★ 6.6k • written 7.0 years ago by
Mathieu Gendarme
▴ 20
0
votes
1
reply
1.2k
views
What is the latest version of R that bioimagetools will run on?
r
bioimagetools
ebimage
updated 7.2 years ago by
Martin Morgan
25k • written 7.2 years ago by
jblument
• 0
1
vote
2
replies
1.4k
views
How to filter overlaping EBImage objects?
ebimage
updated 7.2 years ago by
Wolfgang Huber
★ 13k • written 7.2 years ago by
atbest09
• 0
0
votes
4
replies
1.9k
views
EBImage -- local machine VS cluster -- could not find function "slot"
ebimage
updated 7.3 years ago by
Andrzej Oleś
▴ 750 • written 7.4 years ago by
Mathieu Gendarme
▴ 20
0
votes
1
reply
1.4k
views
Unable to display image in browser from script
software error
R
ebimage
updated 7.4 years ago by
Andrzej Oleś
▴ 750 • written 7.4 years ago by
lsiemann
• 0
3
votes
6
replies
2.7k
views
Relabelling objects - EBImage
ebimage
image analysis
image processing
7.5 years ago
Mathieu Gendarme
▴ 20
3
votes
2
replies
1.4k
views
How to Remove EBImage objects that have holes?
ebimage
updated 7.6 years ago by
Wolfgang Huber
★ 13k • written 7.7 years ago by
atbest09
• 0
1
vote
2
replies
2.3k
views
EBImage cannot read .png images from Image.R
ebimage
ggtree
updated 8.5 years ago by
Andrzej Oleś
▴ 750 • written 8.5 years ago by
benauxier
• 0
2
votes
3
replies
6.2k
views
Error during EBImage installation
ebimage
ggtree
package installation
updated 8.5 years ago by
Andrzej Oleś
▴ 750 • written 8.5 years ago by
slagter.maarten
▴ 10
2
votes
2
replies
2.8k
views
get pixel coordinates interactively with EBimage
EBImage
EBImage
updated 8.6 years ago by
Andrzej Oleś
▴ 750 • written 12.9 years ago by
Arnaud Duranel
▴ 60
2
votes
2
replies
1.5k
views
Deals with image value superior to 0,1 range
value
ebimage
writeImage
error
8.6 years ago
valerian.meline
• 0
0
votes
3
replies
1.5k
views
EBImage / problem in running the code via Rscript
ebimage
image processing
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
kevin.nagel
• 0
1
vote
1
reply
2.3k
views
compute Haralick features
haralick
computeFeatures
EBImage
computeFeatures.haralick
updated 8.9 years ago by
Bernd Fischer
▴ 550 • written 9.0 years ago by
jenesaispas1990
• 0
1
vote
5
replies
2.9k
views
how install the package EBIamge on the software R 3.3.1?
R
ebimage
9.1 years ago
jeankarlosbarrosgalote
▴ 10
3
votes
4
replies
3.0k
views
Focal stacking of images in R/EBImage
ebimage
updated 9.1 years ago by
Bernd Fischer
▴ 550 • written 9.2 years ago by
phil.chapman
▴ 150
7
votes
6
replies
2.4k
views
Processing imaging data from high throughput compound screen with EBImage
ebimage
9.2 years ago
phil.chapman
▴ 150
5
votes
3
replies
2.1k
views
Only 1s created by erode()
r
ebimage
morphology
updated 9.3 years ago by
Andrzej Oleś
▴ 750 • written 9.3 years ago by
loki
• 0
0
votes
6
replies
3.0k
views
EBImage readImage hangs when reading tif file with multiple frames.
software error
ebimage
updated 9.5 years ago by
Andrzej Oleś
▴ 750 • written 9.5 years ago by
krassk
• 0
3
votes
1
reply
2.4k
views
Not able to display actual grayscale image using EBImage
ebimage
image processing
image
display
updated 9.7 years ago by
Andrzej Oleś
▴ 750 • written 9.7 years ago by
Kpurva
▴ 10
1
vote
5
replies
1.8k
views
Opening command with NA and version 4.12.0
ebimage
9.9 years ago • updated 9.8 years ago
jean.luc.lablee
▴ 10
3
votes
2
replies
2.1k
views
EBImage read png causes R to crash
ebimage
bug
10.0 years ago
Henning Redestig
▴ 20
2
votes
1
reply
1.6k
views
Bug Report for R Package "EBImage": log(image, base=2) is same as log(*) (natural log) instead of log2 (base 2).
bug
ebimage
updated 10.1 years ago by
Andrzej Oleś
▴ 750 • written 10.1 years ago by
feimingc
▴ 20
2
votes
5
replies
2.9k
views
EBImage crashing in for-loop
ebimage
crash
image analysis
updated 10.4 years ago by
Andrzej Oleś
▴ 750 • written 10.4 years ago by
mk.applebee
• 0
0
votes
1
reply
1.8k
views
EBImage feature names
ebimage
updated 11.2 years ago by
Andrzej Oleś
▴ 750 • written 11.2 years ago by
Max Kuhn
▴ 60
2
votes
1
reply
2.1k
views
EBImage: Minimum and Maximum intensity on the edge of an object
EBImage
EBImage
updated 12.7 years ago by
Bernd Fischer
▴ 550 • written 12.7 years ago by
Kevin
▴ 40
3
votes
3
replies
1.9k
views
EBImage: filtering in the presence of NAs
PROcess
EBImage
PROcess
EBImage
updated 12.7 years ago by
Wolfgang Huber
★ 13k • written 12.7 years ago by
Arnaud Duranel
▴ 60
0
votes
1
reply
1.4k
views
Problems with medianFilter in EBImage 4.0.0
EBImage
EBImage
updated 12.8 years ago by
Andrzej Oleś
▴ 750 • written 12.8 years ago by
Kent Johnson
▴ 10
0
votes
1
reply
1.5k
views
Memory issues with EBImage
EBImage
EBImage
updated 13.1 years ago by
Gregoire Pau
▴ 60 • written 13.1 years ago by
Guest User
★ 13k
0
votes
2
replies
1.9k
views
EBImage package now easier to install (no system dependencies)
EBImage
EBImage
updated 13.2 years ago by
Robert Baer
▴ 70 • written 13.2 years ago by
Andrzej Oleś
▴ 750
0
votes
0
replies
1.2k
views
EBImage and redhat
EBImage
EBImage
13.3 years ago
Brian Pettegrew
▴ 10
0
votes
4
replies
2.9k
views
Problems installing EBImage - Symbol not found: _gdk_display
GUI
convert
OLIN
EBImage
BiocInstaller
GUI
convert
OLIN
EBImage
BiocInstaller
13.3 years ago
Dan Tenenbaum
★ 8.2k
0
votes
1
reply
1.6k
views
Problems installing EBImage - Symbol not found: _gdk_display
GUI
convert
EBImage
BiocInstaller
GUI
convert
EBImage
BiocInstaller
updated 13.3 years ago by
Dan Tenenbaum
★ 8.2k • written 13.3 years ago by
Olin Silander
▴ 30
0
votes
3
replies
2.0k
views
computing segment areas on an image after thresholding
EBImage
EBImage
updated 13.3 years ago by
Henrik Failmezger
▴ 30 • written 13.3 years ago by
Guest User
★ 13k
0
votes
5
replies
2.1k
views
EBImage Sample code errors
GO
EBImage
GO
EBImage
updated 13.4 years ago by
Dan Tenenbaum
★ 8.2k • written 13.4 years ago by
Robert Baer
▴ 70
0
votes
1
reply
2.5k
views
EBImage installation problem on Linux
EBImage
BiocInstaller
EBImage
BiocInstaller
updated 13.4 years ago by
Wolfgang Huber
★ 13k • written 13.4 years ago by
Guest User
★ 13k
0
votes
1
reply
3.0k
views
Problems installing EBImage
EBImage
EBImage
updated 13.5 years ago by
Gregoire Pau
▴ 60 • written 13.5 years ago by
Visser, V, Dr <vernonvisser@sun.ac.za>
▴ 10
0
votes
21
replies
6.5k
views
unable to readImage using EBImage package
EBImage
EBImage
updated 13.7 years ago by
Nurdiyanah Jambari
▴ 90 • written 13.8 years ago by
Guest User
★ 13k
0
votes
1
reply
1.5k
views
Problems installing EBImage package
convert
EBImage
convert
EBImage
updated 13.7 years ago by
Wolfgang Huber
★ 13k • written 13.7 years ago by
Guest User
★ 13k
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Comment: Question about DESeq2 Design for Paired Treatment Study
by
ATpoint
★ 5.0k
It's a paired analysis so you don't need any patient-specific covariates such as age and sex. What you call batch effect might just be the …
Comment: problem reading bam files into nucleR
by
efoss
▴ 10
I thought I might be able to track down a problematic line in the bam file by repeatedly splitting the bam file in and then running the co…
Answer: two questions about limma
by
Gordon Smyth
53k
Answered here: https://support.bioconductor.org/p/16318/
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
by
Ahmed Salah
• 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR
by
JKim
• 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Votes
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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