Showing : ebimage • reset
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Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny EBImage
16 months ago Wolfgang Huber 13k
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365
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Using EBImage for classifing image in 5 classes
Machine-Learning Image-Processing EBImage
updated 22 months ago by 3.6k • written 22 months ago by • 0
2
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6
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1.9k
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Cannot download “EBImage” library in R
R EBImage
written 3.1 years ago by • 0
1
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3
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1.1k
views
Extracting coordinates of points in an image
EBImage image analysis
3.1 years ago eran.tauber • 0
3
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2
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775
views
EBImage: Annotate multiple images in a grid with display()?
EBImage display
updated 3.7 years ago by ▴ 750 • written 3.7 years ago by ▴ 170
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3
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820
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Installation path not writable
ebimage biocmanager
updated 3.8 years ago by 64k • written 3.8 years ago by • 0
1
vote
2
replies
880
views
EBimage fftw issue
EBImage CentOS
updated 4.8 years ago by 13k • written 4.8 years ago by ▴ 20
0
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1
reply
651
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Best Practices for Speeding Up/Optimizing EBIMage
ebimage
4.9 years ago grockmore • 0
3
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19
replies
2.0k
views
EBImage computeFeatures error
ebimage image processing computefeatures
updated 5.0 years ago by ★ 6.2k • written 5.0 years ago by ▴ 20
0
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1
reply
736
views
What is the latest version of R that bioimagetools will run on?
r bioimagetools ebimage
updated 5.2 years ago by 25k • written 5.2 years ago by • 0
1
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2
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854
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How to filter overlaping EBImage objects?
ebimage
updated 5.2 years ago by 13k • written 5.2 years ago by • 0
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4
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1.2k
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EBImage -- local machine VS cluster -- could not find function "slot"
ebimage
updated 5.3 years ago by ▴ 750 • written 5.4 years ago by ▴ 20
0
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1
reply
781
views
Unable to display image in browser from script
software error R ebimage
updated 5.4 years ago by ▴ 750 • written 5.4 years ago by • 0
3
votes
6
replies
1.6k
views
Relabelling objects - EBImage
ebimage image analysis image processing
5.5 years ago Mathieu Gendarme ▴ 20
3
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2
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826
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How to Remove EBImage objects that have holes?
ebimage
updated 5.7 years ago by 13k • written 5.7 years ago by • 0
1
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2
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1.5k
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EBImage cannot read .png images from Image.R
ebimage ggtree
updated 6.5 years ago by ▴ 750 • written 6.5 years ago by • 0
2
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3
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4.9k
views
Error during EBImage installation
ebimage ggtree package installation
updated 6.5 years ago by ▴ 750 • written 6.5 years ago by ▴ 10
2
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2
replies
2.1k
views
get pixel coordinates interactively with EBimage
EBImage EBImage
updated 6.6 years ago by ▴ 750 • written 10.9 years ago by ▴ 60
2
votes
2
replies
985
views
Deals with image value superior to 0,1 range
value ebimage writeImage error
6.6 years ago valerian.meline • 0
0
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3
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947
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EBImage / problem in running the code via Rscript
ebimage image processing
updated 6.7 years ago by 25k • written 6.7 years ago by • 0
1
vote
1
reply
1.7k
views
compute Haralick features
haralick computeFeatures EBImage computeFeatures.haralick
updated 6.9 years ago by ▴ 550 • written 7.0 years ago by • 0
1
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5
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2.0k
views
how install the package EBIamge on the software R 3.3.1?
R ebimage
7.1 years ago jeankarlosbarrosgalote ▴ 10
3
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4
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2.1k
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Focal stacking of images in R/EBImage
ebimage
updated 7.2 years ago by ▴ 550 • written 7.2 years ago by ▴ 150
7
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6
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1.6k
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Processing imaging data from high throughput compound screen with EBImage
ebimage
7.2 years ago phil.chapman ▴ 150
5
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3
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1.5k
views
Only 1s created by erode()
r ebimage morphology
updated 7.3 years ago by ▴ 750 • written 7.3 years ago by • 0
0
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6
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2.0k
views
EBImage readImage hangs when reading tif file with multiple frames.
software error ebimage
updated 7.5 years ago by ▴ 750 • written 7.5 years ago by • 0
3
votes
1
reply
1.7k
views
Not able to display actual grayscale image using EBImage
ebimage image processing image display
updated 7.7 years ago by ▴ 750 • written 7.7 years ago by ▴ 10
1
vote
5
replies
1.2k
views
Opening command with NA and version 4.12.0
ebimage
7.9 years ago jean.luc.lablee ▴ 10
3
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2
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1.5k
views
EBImage read png causes R to crash
ebimage bug
8.0 years ago Henning Redestig ▴ 20
2
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1
reply
998
views
Bug Report for R Package "EBImage": log(image, base=2) is same as log(*) (natural log) instead of log2 (base 2).
bug ebimage
updated 8.1 years ago by ▴ 750 • written 8.1 years ago by ▴ 20
2
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5
replies
2.2k
views
EBImage crashing in for-loop
ebimage crash image analysis
updated 8.4 years ago by ▴ 750 • written 8.4 years ago by • 0
0
votes
1
reply
1.2k
views
EBImage feature names
ebimage
updated 9.2 years ago by ▴ 750 • written 9.2 years ago by ▴ 60
2
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1
reply
1.5k
views
EBImage: Minimum and Maximum intensity on the edge of an object
EBImage EBImage
updated 10.7 years ago by ▴ 550 • written 10.7 years ago by ▴ 40
3
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3
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1.2k
views
EBImage: filtering in the presence of NAs
PROcess EBImage PROcess EBImage
updated 10.7 years ago by 13k • written 10.7 years ago by ▴ 60
0
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1
reply
908
views
Problems with medianFilter in EBImage 4.0.0
EBImage EBImage
updated 10.8 years ago by ▴ 750 • written 10.8 years ago by ▴ 10
0
votes
1
reply
1.0k
views
Memory issues with EBImage
EBImage EBImage
updated 11.1 years ago by ▴ 60 • written 11.1 years ago by ★ 12k
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2
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1.4k
views
EBImage package now easier to install (no system dependencies)
EBImage EBImage
updated 11.2 years ago by ▴ 70 • written 11.2 years ago by ▴ 750
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0
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791
views
EBImage and redhat
EBImage EBImage
11.3 years ago Brian Pettegrew ▴ 10
0
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4
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2.2k
views
Problems installing EBImage - Symbol not found: _gdk_display
GUI convert OLIN EBImage BiocInstaller GUI convert OLIN EBImage BiocInstaller
11.3 years ago Dan Tenenbaum ★ 8.2k
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1
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1.1k
views
Problems installing EBImage - Symbol not found: _gdk_display
GUI convert EBImage BiocInstaller GUI convert EBImage BiocInstaller
updated 11.3 years ago by ★ 8.2k • written 11.3 years ago by ▴ 30
0
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3
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1.3k
views
computing segment areas on an image after thresholding
EBImage EBImage
updated 11.3 years ago by ▴ 30 • written 11.3 years ago by ★ 12k
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5
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1.5k
views
EBImage Sample code errors
GO EBImage GO EBImage
updated 11.4 years ago by ★ 8.2k • written 11.4 years ago by ▴ 70
0
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1
reply
2.0k
views
EBImage installation problem on Linux
EBImage BiocInstaller EBImage BiocInstaller
updated 11.4 years ago by 13k • written 11.4 years ago by ★ 12k
0
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1
reply
2.5k
views
Problems installing EBImage
EBImage EBImage
updated 11.5 years ago by ▴ 60 • written 11.5 years ago by ▴ 10
0
votes
21
replies
4.8k
views
unable to readImage using EBImage package
EBImage EBImage
updated 11.7 years ago by ▴ 90 • written 11.8 years ago by ★ 12k
0
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1
reply
1.0k
views
Problems installing EBImage package
convert EBImage convert EBImage
updated 11.7 years ago by 13k • written 11.7 years ago by ★ 12k
0
votes
1
reply
1.2k
views
EBImage in R-Cloud
EBImage EBImage
updated 11.7 years ago by ★ 8.2k • written 11.7 years ago by ★ 12k
2
votes
2
replies
1.3k
views
EBImage: Negative pixel intensities?!?
EBImage EBImage
updated 11.8 years ago by 13k • written 11.8 years ago by ★ 2.4k
0
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1
reply
1.1k
views
FrozenRMA how to
Microarray Network hgu133plus2 Biobase PROcess KEGGSOAP beadarray EBImage edgeR frma
updated 11.8 years ago by ▴ 830 • written 11.8 years ago by ▴ 20
0
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3
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1.5k
views
EBImage package
Genetics EBImage Genetics EBImage
updated 11.8 years ago by ★ 8.2k • written 11.8 years ago by ▴ 20
50 results • Page 1 of 1
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Answer: RNASeq time course analysis, missing time points for control by Gordon Smyth 48k
You could fit a spline trend with design matrix `treatment+spline`. Then it won't matter than the control and treatment times don't match u…
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Thanks James for your helpful response. This particular experimental set up is very common in iPSC studies, where multiple differentiations…
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Why is TrtAB - TrtA - TrtB + Control "not really a thing"? i came to this forum answer when attempting to use EdgeR to answer a similar que…
Comment: NCBI protein conversion to CDNA and NCBI gene (in R) by Gordon Smyth 48k
Continuation of https://support.bioconductor.org/p/9155428/
Comment: Why is DMRcate not available for Bioconductor version 3.18? by Tim Peters ▴ 150
Thanks Daniel, Gordon and Lori for flagging this. DSS is only needed for the vignette so I'll remove that section, plus the dependency, som…
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Answer: Confused about the CPM and TMM normalization in edgeR
Answer: Differential gene expression analysis
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
Comment: Why is DMRcate not available for Bioconductor version 3.18?
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