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enhancedvolcano
•
reset
1
vote
7
replies
359
views
Math expression in shapeCustom legend in EnhancedVolcano
EnhancedVolcano
23 days ago • updated 22 days ago
pl23
• 0
0
votes
2
replies
497
views
EnhancedVolcano with labels based on log2 Fold Change
EnhancedVolcano
written 5 months ago by
sara.jacobson
• 0
0
votes
4
replies
1.1k
views
enhanced volcano , different -log10pvalue of the same gene
EnhancedVolcano
RNASeqData
DifferentialExpression
12 months ago
ruba-mahmoud
• 0
4
votes
5
replies
1.8k
views
EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
Transcriptomics
EnhancedVolcano
updated 13 months ago by
Kevin Blighe
★ 3.9k • written 13 months ago by
Peter
▴ 20
0
votes
1
reply
507
views
Error in names(label_color[label_color == "organe"]) <- "lysosome" : 'names' attribute [1] must be the same length as the vector [0]
EnhancedVolcano
updated 13 months ago by
elefth.pavlos
▴ 40 • written 13 months ago by
Phương Thùy
• 0
2
votes
2
replies
1.1k
views
Overlay points with EnhancedVolcano R
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
redafazazi
• 0
0
votes
2
replies
593
views
Only display positive FC on volcano plot
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
Tanner
• 0
2
votes
4
replies
2.1k
views
EnhancedVolcano legendPosition error
EnhancedVolcano
updated 18 months ago by
elefth.pavlos
▴ 40 • written 18 months ago by
Allison
• 0
0
votes
2
replies
890
views
Is it possible for the legend labels to be different from the Colcustom names?
EnhancedVolcano
enha
18 months ago
elefth.pavlos
▴ 40
0
votes
2
replies
996
views
Unable to over/ride colour scheme with custom key-value pairs
EnhancedVolcano
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
patrirodry85
• 0
0
votes
1
reply
1.7k
views
Enhanced Volcano Error when drawing connectors
EnhancedVolcano
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
deena.maurer
• 0
0
votes
0
replies
482
views
MetaVolcanoR usage
limma
MetaVolcanoR
EnhancedVolcano
22 months ago
JAcky
• 0
0
votes
6
replies
2.3k
views
How to change all text, including point labels to Arial?
EnhancedVolcano
updated 23 months ago by
James W. MacDonald
65k • written 23 months ago by
junli1988
• 0
0
votes
3
replies
869
views
change a column within a DESeq results object
EnhancedVolcano
updated 23 months ago by
Guido Hooiveld
★ 4.0k • written 23 months ago by
Matt
• 0
0
votes
5
replies
1.3k
views
Italicise
EnhancedVolcano
updated 23 months ago by
Kevin Blighe
★ 3.9k • written 24 months ago by
Pau
• 0
3
votes
5
replies
2.5k
views
Print EnhancedVolcano Plot as jpeg or similar in R Notebook
EnhancedVolcano
updated 2.0 years ago by
Kevin Blighe
★ 3.9k • written 2.0 years ago by
Bine
▴ 40
0
votes
0
replies
879
views
Plotting Upregulated and down regulated genes in different colour
EnhancedVolcano
2.2 years ago
Somenath
• 0
1
vote
4
replies
1.6k
views
Issue with selectively labelling genes in the Enhanced Volcano package
EnhancedVolcano
updated 2.3 years ago by
Kevin Blighe
★ 3.9k • written 2.3 years ago by
Jonathan
▴ 10
1
vote
1
reply
1.1k
views
Issue with lengthConnectors in EnhancedVolcano
EnhancedVolcano
updated 4 months ago by
mohamad.hajo89
• 0 • written 2.4 years ago by
ikotlar
▴ 10
1
vote
3
replies
1.6k
views
Enhancedvolcano labels superimposed on points
EnhancedVolcano
updated 2.4 years ago by
Kevin Blighe
★ 3.9k • written 2.4 years ago by
acharest
• 0
0
votes
0
replies
715
views
EnhancedVolcano, coloring of a subset of labels
EnhancedVolcano
2.5 years ago
bradyb
• 0
0
votes
2
replies
1.6k
views
ERROR installing EnhancedVolcano in R4.1
EnhancedVolcano
updated 2.6 years ago by
Kevin Blighe
★ 3.9k • written 2.6 years ago by
Raj
• 0
0
votes
5
replies
1.9k
views
EnhancedVolcano plot - labels
EnhancedVolcano
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
Johannes
• 0
5
votes
4
replies
4.9k
views
ylim and xlim in Enhanced Volcano
DESeq2
EnhancedVolcano
Bioconductor
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
Rachel
• 0
2
votes
6
replies
4.0k
views
How can I use geom_label_repel with EnhancedVolcano?
ggrepel
RNASeq
R
EnhancedVolcano
2.8 years ago
Loren
▴ 10
2
votes
1
reply
5.1k
views
EnhancedVolcano Label Question
RNASeq
EnhancedVolcano
DEGs
updated 2.9 years ago by
Kevin Blighe
★ 3.9k • written 2.9 years ago by
robledoj13
• 0
7
votes
8
replies
6.6k
views
Warning in EnhancedVolcano plot
volcano-plot
EnhancedVolcano
updated 3.0 years ago by
Kevin Blighe
★ 3.9k • written 3.1 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
4
replies
4.0k
views
EnhancedVolcano plot with colCustom
EnhancedVolcano
3.1 years ago
Neeraja Vegesna
▴ 10
1
vote
1
reply
2.2k
views
Enhanced Volcano Plot Controlling Color Layers
EnhancedVolcano
3.1 years ago
dk0319
• 0
6
votes
9
replies
2.1k
views
How to better design a Volcano plot
EnhancedVolcano
updated 3.3 years ago by
Kevin Blighe
★ 3.9k • written 3.3 years ago by
suxxa
▴ 20
1
vote
8
replies
3.4k
views
Problem selectively labelling points in the Enhanced Volcano package
EnhancedVolcano
3.4 years ago
Peter
▴ 10
6
votes
8
replies
3.6k
views
Jitter p-values in volcano plot
EnhancedVolcano
DESeq2
updated 3.5 years ago by
Michael Love
42k • written 3.5 years ago by
philipp.rewe
▴ 20
4
votes
2
replies
2.8k
views
enhancedVolcano: Why are only a few of my select labels showing up?
enha
EnhancedVolcano
3.6 years ago • updated 3.5 years ago
noahhelton98
▴ 20
3
votes
5
replies
2.1k
views
Volcano plot - select additional gene
EnhancedVolcano
RNASeqR
R
volcanoplot
updated 3.6 years ago by
Kevin Blighe
★ 3.9k • written 3.6 years ago by
camillab.
▴ 10
1
vote
12
replies
1.7k
views
EnhancedVolcano - highlight specific points by changing shape
enhancedvolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
n.tear
▴ 20
0
votes
20
replies
3.2k
views
pointSize, labSize, and DrawConnectors error when plotting EnhancedVolcano
EnhancedVolcano
3.7 years ago • updated 3.4 years ago
knholm
• 0
0
votes
1
reply
2.2k
views
Increase text size of axis labels in EnhancedVolcano
EnhancedVolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
knholm
• 0
4
votes
7
replies
2.6k
views
visualize significant upregultaed genes and downregultaed genes with different colors (EnhancedVolcano)
enhancedvolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
gaom001
▴ 10
0
votes
3
replies
877
views
Enhanced volcanoplots from DESeq2
EnhancedVolcano
updated 4.2 years ago by
Michael Love
42k • written 4.2 years ago by
rimss.khurana
• 0
1
vote
6
replies
22k
views
Log2FC data type error in EnhansedVolcano package
software error
enhancedvolcano
4.6 years ago
sauuyer
▴ 10
0
votes
8
replies
12k
views
How to generate a volcano plot when p-values from DESeq2 are zero?
deseq2
pvalue
visualization
enhancedvolcano
rnaseq
updated 5.3 years ago by
Michael Love
42k • written 5.3 years ago by
ricardo3889
• 0
41 results • Page
1 of 1
Recent ...
Replies
Answer: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
Your code is poorly readable. Suggest you select and then highlight with markdown using the `10101` button. Generally, colData(dds) must…
Answer: Subsetting RNAseq data | voomaByGroup()
by
Gordon Smyth
50k
Judging from your MDS plot, cell types 1 and 2 look radically different, so it would make perfect sense to analyse them separately. There's…
Answer: Numerical differences in DESeq2 output depending on different design matrix cons
by
Michael Love
42k
Yes there can be small numerical differences in the estimated quantities because of how the algorithms decide to stop iterating.
Answer: DESeq2- Mysterious interaction suppresses DEGs
by
Michael Love
42k
Removing samples from one group nevertheless changes the variance estimation (dispersion) for all comparisons. So you could have pushed one…
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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