Showing : flowcytometry • reset
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Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
flowWorkspace FlowCytometry
4 months ago Valeria • 0
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334
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Trouble with double delimiters in .fcs file (flowCore package)
flowCore FlowCytometry FlowCytometryData
10 months ago vpochic • 0
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
23 months ago info ▴ 10
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800
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Merging 2 staining panels
FlowCytometry flowCore
2.7 years ago michaela.gregorova13 • 0
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1
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1.6k
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How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
3.0 years ago aguirre ▴ 20
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947
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How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
3.0 years ago Dennis.hinkel • 0
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1
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1.2k
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creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 3.1 years ago by ★ 4.0k • written 3.1 years ago by • 0
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836
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gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
3.1 years ago Noël • 0
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2.8k
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Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 3.1 years ago by ▴ 360 • written 3.1 years ago by • 0
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983
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Reducing/sampling number of FCS events
FlowCytometry flowCore
3.9 years ago markkelly1983 ▴ 20
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1.1k
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Job: Bioconductor developer
FlowCytometry flowCore
3.9 years ago markkelly1983 ▴ 20
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1.5k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
6.6 years ago fabrizio.benedetti.82 • 0
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6
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2.8k
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spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 7.8 years ago by • 0 • written 9.7 years ago by • 0
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1.5k
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[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 7.8 years ago by ★ 1.3k • written 7.8 years ago by • 0
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1
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1.6k
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Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
8.8 years ago mo • 0
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2
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2.6k
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Scaling fcs files with flowCore
flowCore flowcytometry
9.6 years ago Jiang, Mike ★ 1.3k
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1
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2.3k
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FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
9.7 years ago Jiang, Mike ★ 1.3k
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1
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1.6k
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FlowViz package question
flowviz flowcytometry
9.7 years ago Jiang, Mike ★ 1.3k
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1
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1.9k
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read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
9.7 years ago e.bestion • 0
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2
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1.6k
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openCyto - samples with low cell counts
flowcytometry opencyto
9.8 years ago Jiang, Mike ★ 1.3k
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1
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1.7k
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samples are reordered in read.flowSet
flowcore flowcytometry
10.3 years ago Jiang, Mike ★ 1.3k
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2
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2.4k
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xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 10.3 years ago by ★ 1.3k • written 10.3 years ago by • 0
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0
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1.7k
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Re: FlowStats help
flowclust opencyto flowcytometry
10.7 years ago Jiang, Mike ★ 1.3k
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1
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2.0k
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flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 10.9 years ago by ★ 1.3k • written 11.0 years ago by ▴ 10
4
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1
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2.1k
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News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
11.2 years ago Greg Finak ▴ 150
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1.5k
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FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
12.8 years ago Pieter Coussement ▴ 30
26 results • Page 1 of 1
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Answer: Error installing Seqinfo by fabio.marroni • 0
I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…
Comment: Getting a large intercept with DESeq2 by Michael Love 43k
Thanks James -- Denise you can check the "note on factor levels" in the vignette. And I'd recommend `plotCounts()` for looking at individu…
Comment: Getting a large intercept with DESeq2 by James W. MacDonald 68k
As a trivial example, consider this: ``` > model.matrix(~Treatment, data.frame(Treatment = factor(rep(1:3, each = 4)))) (Intercept) Tre…
Answer: Getting a large intercept with DESeq2 by James W. MacDonald 68k
The default parameterization in R is a treatment-contrasts parameterization that sets one of your groups as the baseline. So the intercept …
Answer: Must I do pseudobulk analysis on Cell Surface Protein Labeling data of Single C by ATpoint ★ 5.0k
There is no "MUST", but pseudobulk aggregation is beneficial to a) enable use of tested and robust methods such as limma (though it could u…
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Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Issues with downloading biomaRt - SeqInfo and S4 Vectors
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Using edgeR or DESeq2 to analyze allele-specific expression?
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