Showing : flowcytometry • reset
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Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
flowWorkspace FlowCytometry
updated 17 days ago by ★ 4.0k • written 5 months ago by • 0
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0
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350
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Trouble with double delimiters in .fcs file (flowCore package)
flowCore FlowCytometry FlowCytometryData
11 months ago vpochic • 0
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1.1k
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
23 months ago info ▴ 10
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812
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Merging 2 staining panels
FlowCytometry flowCore
2.8 years ago michaela.gregorova13 • 0
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1
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1.7k
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How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
3.1 years ago aguirre ▴ 20
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966
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How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
3.1 years ago Dennis.hinkel • 0
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1
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1.2k
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creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 3.1 years ago by ★ 4.0k • written 3.1 years ago by • 0
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849
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gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
3.1 years ago Noël • 0
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9
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2.9k
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Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 3.2 years ago by ▴ 360 • written 3.2 years ago by • 0
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996
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Reducing/sampling number of FCS events
FlowCytometry flowCore
3.9 years ago markkelly1983 ▴ 20
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1.1k
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Job: Bioconductor developer
FlowCytometry flowCore
4.0 years ago markkelly1983 ▴ 20
0
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1
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1.5k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
6.7 years ago fabrizio.benedetti.82 • 0
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6
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2.9k
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spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 7.8 years ago by • 0 • written 9.8 years ago by • 0
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1
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1.5k
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[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 7.9 years ago by ★ 1.3k • written 7.9 years ago by • 0
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1
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1.6k
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Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
8.8 years ago mo • 0
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2
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2.6k
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Scaling fcs files with flowCore
flowCore flowcytometry
9.7 years ago Jiang, Mike ★ 1.3k
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1
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2.3k
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FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
9.8 years ago Jiang, Mike ★ 1.3k
0
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1
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1.6k
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FlowViz package question
flowviz flowcytometry
9.8 years ago Jiang, Mike ★ 1.3k
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1
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1.9k
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read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
9.8 years ago e.bestion • 0
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2
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1.6k
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openCyto - samples with low cell counts
flowcytometry opencyto
9.9 years ago Jiang, Mike ★ 1.3k
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1
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1.7k
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samples are reordered in read.flowSet
flowcore flowcytometry
10.4 years ago Jiang, Mike ★ 1.3k
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2
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2.4k
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xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 10.4 years ago by ★ 1.3k • written 10.4 years ago by • 0
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0
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1.7k
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Re: FlowStats help
flowclust opencyto flowcytometry
10.8 years ago Jiang, Mike ★ 1.3k
1
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1
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2.0k
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flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 10.9 years ago by ★ 1.3k • written 11.1 years ago by ▴ 10
4
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1
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2.1k
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News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
11.2 years ago Greg Finak ▴ 150
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1.5k
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FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
12.9 years ago Pieter Coussement ▴ 30
26 results • Page 1 of 1
Recent ...
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Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Answer: PTM analysis in LIMPA by Gordon Smyth 53k
For PTM analysis, the usual quantification command dpcQuant() is replaced by dpcImpute(). Otherwise the limpa pipeline is the same as for a…
Answer: problem reading bam files into nucleR by James W. MacDonald 68k
The first step is to update to the current versions of R/Bioconductor and try again. It's possible that you have run into a bug that's alre…
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C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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