Showing : flowcytometry • reset
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Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
flowWorkspace FlowCytometry
updated 25 days ago by ★ 4.0k • written 5 months ago by • 0
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0
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361
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Trouble with double delimiters in .fcs file (flowCore package)
flowCore FlowCytometry FlowCytometryData
11 months ago vpochic • 0
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1.1k
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News: Online course - FLOW CYTOMETRY DATA ANALYSIS WITH R/BIOCONDUCTOR
Bioconductor FlowCytometryData FlowCytometry
24 months ago info ▴ 10
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820
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Merging 2 staining panels
FlowCytometry flowCore
2.8 years ago michaela.gregorova13 • 0
2
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1
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1.7k
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How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
3.1 years ago aguirre ▴ 20
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975
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How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
3.1 years ago Dennis.hinkel • 0
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1.3k
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creating a NOT gate for gating out a single quadrant in a quadrant gate openCyto
FlowCytometry Opencyto
updated 3.1 years ago by ★ 4.0k • written 3.1 years ago by • 0
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859
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gate_quad_sequential as parent gate for downstream gating in opencyto CSV template
opencyto FlowCytometry
3.1 years ago Noël • 0
2
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9
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2.9k
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Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 3.2 years ago by ▴ 360 • written 3.2 years ago by • 0
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1.0k
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Reducing/sampling number of FCS events
FlowCytometry flowCore
4.0 years ago markkelly1983 ▴ 20
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1.1k
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Job: Bioconductor developer
FlowCytometry flowCore
4.0 years ago markkelly1983 ▴ 20
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1
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1.6k
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[flowSOM] extracting data from tree
flowcytometry flowSOM flowSET flowFrame
6.7 years ago fabrizio.benedetti.82 • 0
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6
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2.9k
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spillover::flowCore problem: Error in match(unstained, sampleNames(x))
flowcore spillover flowcytometry
updated 7.8 years ago by • 0 • written 9.8 years ago by • 0
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1
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1.5k
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[flowCore] linearization of logarithmic data seems to be calculated wrong
flowcore flowcytometry
updated 7.9 years ago by ★ 1.3k • written 7.9 years ago by • 0
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1
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1.6k
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Installation of "flowWorkspace" on Ubuntu fails
bioconductor R flowcytometry
8.8 years ago mo • 0
0
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2
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2.6k
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Scaling fcs files with flowCore
flowCore flowcytometry
9.7 years ago Jiang, Mike ★ 1.3k
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1
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2.3k
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FlowWorkspace and norm2Filter
flowcytometry opencyto flowworkspace flowcore
9.8 years ago Jiang, Mike ★ 1.3k
0
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1
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1.6k
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FlowViz package question
flowviz flowcytometry
9.8 years ago Jiang, Mike ★ 1.3k
0
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1
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1.9k
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read.flowSet error Error: vector::_M_range_check
software error read.flowset() read.fcs flowcore flowcytometry
9.8 years ago e.bestion • 0
1
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2
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1.6k
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openCyto - samples with low cell counts
flowcytometry opencyto
9.9 years ago Jiang, Mike ★ 1.3k
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1
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1.7k
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samples are reordered in read.flowSet
flowcore flowcytometry
10.4 years ago Jiang, Mike ★ 1.3k
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2
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2.4k
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xyplot can't find channel (flowViz)
flowcore flowviz flowcytometry
updated 10.4 years ago by ★ 1.3k • written 10.4 years ago by • 0
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0
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1.7k
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Re: FlowStats help
flowclust opencyto flowcytometry
10.8 years ago Jiang, Mike ★ 1.3k
1
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1
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2.0k
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flowCore: using read.FCS with which.lines is not time efficient?
flowcore read.FCS flowcytometry
updated 10.9 years ago by ★ 1.3k • written 11.1 years ago by ▴ 10
4
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1
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2.1k
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News: New Flow Cytometry Data Analysis Framework
flowcore flowcytometry opencyto new News
11.3 years ago Greg Finak ▴ 150
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1.5k
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FlowCore - reading in flowSets
FlowCytometry PROcess flowCore FlowCytometry PROcess flowCore
12.9 years ago Pieter Coussement ▴ 30
26 results • Page 1 of 1
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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