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genes
•
reset
0
votes
2
replies
874
views
Deseq2 design
DESeq2
genes
Differential
expressed
2.6 years ago
Syed Zaheer
▴ 10
0
votes
1
reply
1.8k
views
enrichment to common gene
GeneSetEnrichment
genes
genetogo
updated 3.5 years ago by
Basti
▴ 780 • written 3.5 years ago by
Noy
• 0
0
votes
1
reply
990
views
find genes near a microRNA binding site
R
microRNA
genes
binding Site
6.5 years ago
pengu447
• 0
2
votes
4
replies
2.0k
views
Majority upregulated genes in edgeR
edger
differential expression
genes
fold change
updated 6.5 years ago by
Aaron Lun
★ 29k • written 6.5 years ago by
ilovesuperheroes1993
• 0
1
vote
2
replies
1.2k
views
Two factors design with DESEq2
deseq2
genes
expression
updated 6.7 years ago by
Michael Love
43k • written 6.7 years ago by
UserAnonyme
• 0
1
vote
1
reply
1.6k
views
How to retreive topGO significant IDs of genes after enrichment test ?
topGO
significant
enrichment
genes
IDs
6.9 years ago
David ROUX
▴ 20
0
votes
1
reply
1.4k
views
Running DESeq2 on top variable genes?
deseq2
variance
genes
updated 8.1 years ago by
Michael Love
43k • written 8.1 years ago by
hs.lansdell
▴ 20
2
votes
2
replies
1.4k
views
list fo genes by cnv
cnv
genes
genomic ranges
splitByOverlap
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
julrodr80
▴ 30
0
votes
1
reply
951
views
No differentyally expresses genes
deseq2
genes
updated 9.4 years ago by
Michael Love
43k • written 9.4 years ago by
silviajserrano
• 0
0
votes
3
replies
3.2k
views
Wald vs LRT: different number of significant genes when testing the same coefficient
deseq2
wald
lrt
genes
significance
updated 9.5 years ago by
Michael Love
43k • written 9.5 years ago by
aziza
▴ 20
0
votes
1
reply
3.0k
views
Display subset of rownames in large heatmap?
heatmap
rownames
genes
10.3 years ago
johnlee.johnson
• 0
0
votes
2
replies
1.8k
views
Help needed to identify common genes among datasets
datasets
genes
gene expression
updated 10.3 years ago by
Steve Lianoglou
★ 13k • written 10.3 years ago by
vavecilla
• 0
12 results • Page
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Comment: nice 3D displays for PCA analysis
by
adam80haynes
• 0
That's a fascinating application of 3D printing in a scientific context. Using this technology to create custom lab equipment, models of mo…
Comment: Bioinformatician at the Lausanne University Hospital
by
TikTsokaasocissalpc
• 0
The Random Word Generator in Italian is a useful tool for generating ideas and exploring new approaches, much like the innovative research …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
TikTsokaasocissalpc
• 0
If you want to share your research progress and microbiome discoveries with colleagues or friends, [snaptroid android][1] download free mak…
Answer: Limma-voom sample weights and impact on DEG numbers
by
Gordon Smyth
53k
I recommend that you always use voomLmFit() instead of the earlier voom() or voomWithQualityWeights() functions. Personally, I would use sa…
Answer: wgcna module preseravtion taking too long?
by
ATpoint
★ 5.0k
WGCNA is not a Bioconductor package, you won't get an answer here. Consider biostars.org or the r/bioinformatics reddit. Note that 10 sampl…
Votes
Answer: DESeq2 class error: superclass "ExpData" not defined in the environment of the o
Limma-voom sample weights and impact on DEG numbers
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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Gordon Smyth
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Hervé Pagès
16k
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Vincent J. Carey, Jr.
6.7k
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Istvan Albert
▴ 50
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Dario Strbenac
★ 1.6k
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