Bioconductor Genesis

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216

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GENESIS

11 weeks ago Stephanie M. Gogarten ▴ 870

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421

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GENESIS GWASTools GDSfile

updated 5 months ago by Stephanie M. Gogarten ▴ 870 • written 5 months ago by Mindy wang • 0

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402

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GENESIS SeqVarTools

updated 6 months ago by Stephanie M. Gogarten ▴ 870 • written 6 months ago by pjuge • 0

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452

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GENESIS autosome-only=FALSE? PCAir

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by gabry.scata • 0

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280

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GENESIS admixMap

6 months ago mailtoshivam13 • 0

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776

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GENESIS

updated 10 months ago by Stephanie M. Gogarten ▴ 870 • written 10 months ago by SuperDad • 0

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445

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assocTestSingle GENESIS

written 15 months ago by SuperD • 0

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711

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kingToMatrix GENESIS Plants

18 months ago Monica • 0

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4.1k

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gwas genesis p-value q-q-plot

updated 3.3 years ago by Anna • 0 • written 4.4 years ago by solanum • 0

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850

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GENESIS

3.4 years ago Stephanie M. Gogarten ▴ 870

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688

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GENESIS

3.5 years ago Stephanie M. Gogarten ▴ 870

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1.4k

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genesis effect allele association analysis

updated 3.7 years ago by Stephanie M. Gogarten ▴ 870 • written 3.7 years ago by ucbtapc • 0

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789

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genesis gwastools

3.8 years ago Stephanie M. Gogarten ▴ 870

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908

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genesis

updated 3.8 years ago by Stephanie M. Gogarten ▴ 870 • written 3.8 years ago by o.giannakopoulou • 0

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1.1k

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genesis gds SeqVarData

updated 3.9 years ago by Stephanie M. Gogarten ▴ 870 • written 3.9 years ago by JT • 0

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1.5k

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Genesis

4.2 years ago alipka ▴ 10

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673

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GENESIS

updated 4.3 years ago by Stephanie M. Gogarten ▴ 870 • written 4.3 years ago by lassana.a.samarakoon ▴ 10

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865

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rna-seq tmixclust k-means clustering gene expression genesis

4.4 years ago astridite • 0

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809

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genesis

4.5 years ago Stephanie M. Gogarten ▴ 870

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1.3k

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GENESIS

4.5 years ago Corey.Cox • 0

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1.0k

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GENESIS zscore wald

updated 4.6 years ago by Stephanie M. Gogarten ▴ 870 • written 4.6 years ago by lassana.a.samarakoon ▴ 10

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1.4k

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genesis output score

updated 4.6 years ago by Stephanie M. Gogarten ▴ 870 • written 4.6 years ago by lassana.a.samarakoon ▴ 10

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1.1k

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genesis admixmap

updated 4.7 years ago by Stephanie M. Gogarten ▴ 870 • written 4.7 years ago by GENOMIC_region • 0

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1.7k

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Genesis Installation

updated 4.7 years ago by Mike Smith ★ 6.5k • written 4.7 years ago by winstondunnmd ▴ 10

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1.2k

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genesis fitnullmodel gwas ascertainment

updated 4.8 years ago by mconomos ▴ 70 • written 4.8 years ago by ferranpauls10 • 0

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2.8k

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genesis admixmap

updated 5.0 years ago by Stephanie M. Gogarten ▴ 870 • written 5.0 years ago by GENOMIC_region • 0

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918

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genesis

5.1 years ago Stephanie M. Gogarten ▴ 870

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2.3k

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genesis pcrelate gds

updated 5.2 years ago by Stephanie M. Gogarten ▴ 870 • written 5.2 years ago by o.giannakopoulou • 0

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1.8k

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genesis gwastools seqarray

5.6 years ago • updated 5.2 years ago Stephanie M. Gogarten ▴ 870

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982

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GENESIS GWAS resampling resample statistics

5.3 years ago naglemi ▴ 10

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929

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GENESIS GWAS AssocTestMM

updated 5.5 years ago by mconomos ▴ 70 • written 5.5 years ago by naglemi ▴ 10

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917

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genesis pcrrelate gds

updated 5.5 years ago by Stephanie M. Gogarten ▴ 870 • written 5.5 years ago by roll • 0

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909

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genesis snprelate

5.6 years ago Stephanie M. Gogarten ▴ 870

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980

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GENESIS GWAS GDS

updated 5.6 years ago by zhengx ▴ 30 • written 5.6 years ago by naglemi ▴ 10

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785

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genesis

5.8 years ago Stephanie M. Gogarten ▴ 870

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1.2k

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GENESIS assoctestmm GWAS

updated 5.8 years ago by mconomos ▴ 70 • written 5.8 years ago by naglemi ▴ 10

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1.5k

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LMM GWAS GENESIS assocTestMM

updated 5.8 years ago by mconomos ▴ 70 • written 5.8 years ago by naglemi ▴ 10

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1.7k

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genesis pcair

6.0 years ago GENOMIC_region • 0

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1.8k

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genesis

6.0 years ago Stephanie M. Gogarten ▴ 870

39 results • Page 1 of 1

Recent ...

Replies

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Hervé Pagès 16k

Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0

I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …

Comment: Help with running egsea() by James W. MacDonald 65k

Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…

Comment: Help with running egsea() by Chris • 0

Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…

Votes

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Help with running egsea()

Answer: Trim/Filter out-of-bounds GRanges

Comment: Help with running egsea()

Answer: How to save the DEXSeq results

Awards • All

Scholar to Michael Love 41k

Popular Question to Malcolm Cook ★ 1.6k

Teacher to Gordon Smyth 50k