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Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Martin Morgan
25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Benjamin
•
0
Still happening
using pre-existing size factors
estimating dispersions
gene-wise dispersion estimates: 15 workers
mean-dis…
Answer: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Benjamin
•
0
Still happening in a clean install
Comment: limpa analysis advice
by
Gordon Smyth
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Yes, we use Astral currently. The main dataset in the limpa preprint is Astral.
I don't see any major problems with your data and I think …
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