Showing : infrastructure • reset
0
votes
0
replies
804
views
News: Single Package Builder / New Package Submission
new package build machines infrastructure News
4.5 years ago shepherl 4.1k
1
vote
3
replies
3.0k
views
deseq2 DESeqDataSet size when saved
deseq2 infrastructure deseqdataset importing
updated 6.1 years ago by 42k • written 6.1 years ago by • 0
4
votes
1
reply
2.7k
views
News: Bioconductor git transition BETA phase starts now.
git svn infrastructure bioconductor News
7.3 years ago nitesh.turaga ▴ 140
0
votes
1
reply
944
views
The bioconductor.org main website will be down for a brief period for maintenance. Starting approximately 7:45 am EST. Should be back up around 8:00 …
infrastructure
7.8 years ago gregory.wargula ▴ 30
0
votes
7
replies
2.5k
views
Bioconductor 2.6 is released
Sequencing Microarray Visualization Infrastructure PROcess beadarray keggorthology eisa
updated 8.2 years ago by • 0 • written 14.6 years ago by ★ 1.6k
1
vote
0
replies
1.7k
views
News: BioCAsia, 4th November 2016, Brisbane, Australia
conference transcription epigenomics visualization infrastructure News
8.3 years ago Matthew Ritchie ▴ 1000
3
votes
0
replies
1.9k
views
News: BioCAsia, 8 Sept 2015, Tokyo
sequencing transcription epigenomics visualization infrastructure News
9.4 years ago • updated 9.3 years ago Matthew Ritchie ▴ 1000
0
votes
5
replies
3.6k
views
Running the GSEA algorithm
Infrastructure PGSEA GSEABase SeqGSEA Infrastructure PGSEA GSEABase SeqGSEA
updated 10.6 years ago by ★ 1.3k • written 10.6 years ago by ▴ 660
0
votes
0
replies
2.0k
views
job: head of core facility bioinformatics (Mainz/Germany)
Epigenetics Infrastructure Epigenetics Infrastructure
10.9 years ago Holger Klein ▴ 20
0
votes
0
replies
1.5k
views
Bioinformatics Facility Director Position at UC Riverside
Proteomics Infrastructure Proteomics Infrastructure
11.1 years ago Thomas Girke ★ 1.7k
0
votes
0
replies
1.3k
views
Reopening of Computational Biologist position at Genentech
Infrastructure PROcess Infrastructure PROcess
11.3 years ago Michael Lawrence ★ 11k
0
votes
2
replies
1.2k
views
*Ranges paper published
Infrastructure IRanges GenomicFeatures GenomicRanges Infrastructure IRanges GenomicFeatures
updated 11.3 years ago by ★ 4.2k • written 11.3 years ago by ★ 11k
0
votes
4
replies
1.9k
views
DexSeq extracols option
RNASeq Microarray Genetics Annotation Normalization Infrastructure Cancer probe limma
updated 11.3 years ago by ★ 1.9k • written 11.3 years ago by ▴ 40
0
votes
1
reply
1.1k
views
convert IDs in a data frame?
GO Infrastructure Cancer GO Infrastructure Cancer
updated 11.3 years ago by ★ 7.2k • written 11.3 years ago by 16k
0
votes
5
replies
5.1k
views
Finding mismatches between reads and reference sequence
Infrastructure Cancer BSgenome BSgenome Infrastructure Cancer BSgenome BSgenome
updated 11.6 years ago by ▴ 30 • written 11.6 years ago by 16k
0
votes
0
replies
1.8k
views
Bioconductor Digest, Vol 121, Issue 29
miRNA Annotation Normalization Visualization Clustering Infrastructure Cancer BSgenome vsn
11.6 years ago Matthew Thornton ▴ 380
0
votes
2
replies
2.8k
views
[R] Error in setMethod("combine"... was - Error when installing globaltest package
Infrastructure Cancer Biobase tkWidgets globaltest BiocInstaller BiocGenerics Cancer
updated 11.6 years ago by 25k • written 11.6 years ago by ▴ 40
0
votes
0
replies
1.4k
views
Job: Bioinformatician (postdoc, indefinite) Pirbright Institute
Infrastructure Infrastructure
11.6 years ago Jan T Kim ▴ 50
0
votes
10
replies
2.7k
views
assignChromosomeRegion in 2.6.0 ChIPpeakAnno
Microarray Annotation GO Network Regression Survival Infrastructure Escherichia coli ROC
11.7 years ago • updated 11.6 years ago Julie Zhu ★ 4.3k
0
votes
2
replies
1.7k
views
GSEABase error parsing msigdb_v3.1.xml
GO Infrastructure hgu95av2 Biobase annotate graph Category AnnotationDbi BiocGenerics GO
updated 11.8 years ago by 25k • written 11.8 years ago by ▴ 80
0
votes
0
replies
1.4k
views
Open computational biologist position at Genentech
Infrastructure Infrastructure
11.8 years ago Michael Lawrence ★ 11k
0
votes
0
replies
1.3k
views
Bioinformatics Position Opening
Proteomics Infrastructure Proteomics Infrastructure
11.8 years ago Thomas Girke ★ 1.7k
0
votes
0
replies
1.8k
views
Bioinformatician Job at Pirbright Institute
Genetics Infrastructure Genetics Infrastructure
11.9 years ago Jan T Kim ▴ 50
0
votes
5
replies
1.2k
views
pooling for parallel hierarchical operations
Infrastructure Infrastructure
updated 12.0 years ago by 25k • written 12.0 years ago by ★ 11k
0
votes
2
replies
2.6k
views
counting RNA-seq reads in R/BioC
GO Infrastructure Rsubread easyRNASeq GO Infrastructure Rsubread easyRNASeq
updated 12.2 years ago by ★ 6.8k • written 12.2 years ago by ▴ 880
0
votes
8
replies
2.2k
views
good news and bad news
Infrastructure Cancer IRanges GenomicRanges Infrastructure Cancer IRanges GenomicRanges
updated 12.2 years ago by ★ 13k • written 12.2 years ago by 16k
0
votes
0
replies
1.6k
views
Bioinformatics Academic Coordinator Job Posting
Proteomics Infrastructure Proteomics Infrastructure
12.3 years ago Guest User ★ 13k
0
votes
0
replies
1.0k
views
2012 Bioconductor European Developers' Workshop - annoucement
Proteomics Infrastructure Proteomics Infrastructure
12.4 years ago Mark Robinson ▴ 880
0
votes
0
replies
1.3k
views
Open Position - Academic Coordinator for Bioinformatics
Proteomics Infrastructure Proteomics Infrastructure
12.6 years ago Thomas Girke ★ 1.7k
0
votes
0
replies
1.3k
views
2 more Job Announcements
Genetics Infrastructure Genetics Infrastructure
12.7 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
1.4k
views
[Job] Bioinformatician-NGS (Vienna, Austria)
Sequencing Infrastructure Sequencing Infrastructure
12.9 years ago Ido M. Tamir ▴ 150
0
votes
2
replies
1.1k
views
"internal equal" overlap mode for GRangesList
Infrastructure Infrastructure
updated 13.0 years ago by ★ 1.6k • written 13.0 years ago by ★ 11k
0
votes
0
replies
1.6k
views
illuminaHumanv4 mappings
Infrastructure Cancer Homo sapiens probe AnnotationDbi ASSIGN Infrastructure Cancer probe
13.1 years ago Mark Cowley ▴ 910
0
votes
2
replies
1.7k
views
GGtools and GGBase installation problems
Infrastructure GUI Ruuid GGtools GGBase Infrastructure GUI Ruuid GGtools GGBase
updated 13.7 years ago by 6.7k • written 13.7 years ago by ▴ 460
0
votes
5
replies
1.4k
views
A code kata: evening-out *Ranges ends.
Infrastructure Cancer IRanges Infrastructure Cancer IRanges
14.2 years ago Steve Lianoglou ★ 13k
0
votes
0
replies
910
views
NOTE: bioconductor.org system maintenance; planned downtime 12pm-1pm PDT Friday 9/18
Infrastructure Infrastructure
15.2 years ago Patrick Aboyoun ★ 1.6k
0
votes
0
replies
1.1k
views
Research positions available in neuroproteomics
Proteomics Infrastructure Proteomics Infrastructure
15.7 years ago Abhilash Venu ▴ 340
0
votes
0
replies
1.5k
views
GSEA to discover co-regulated genes
Transcription Annotation Pathways Infrastructure probe convert GSEABase Transcription
15.8 years ago Paul Geeleher ★ 1.3k
0
votes
1
reply
939
views
Project Enquiry!
Infrastructure Infrastructure
16.2 years ago Kat ▴ 20
0
votes
0
replies
1.0k
views
Staff Position at EBI: Computational Scientist / Bioconductor
Infrastructure Infrastructure
16.2 years ago Wolfgang Huber ★ 13k
0
votes
1
reply
1.5k
views
GSEABase error in parsing msigdb_v2.5.xml
GO Infrastructure hgu95av2 Biobase Ruuid AnnotationDbi GO Infrastructure hgu95av2 Biobase
updated 16.5 years ago by 25k • written 16.5 years ago by ▴ 130
1
vote
4
replies
5.0k
views
Affymetrix Human Gene 1.0 ST Array
Infrastructure cdf probe affy Infrastructure cdf probe affy
16.5 years ago Hans-Ulrich Klein ▴ 330
0
votes
1
reply
1.4k
views
BioC 2.2 now available
SNP Microarray Genetics Annotation Preprocessing Bayesian Clustering Infrastructure Cancer
updated 16.5 years ago by ★ 1.6k • written 16.5 years ago by 25k
0
votes
0
replies
930
views
To biomaRt users: Major downtime March 7th 4pm - March 8th 6pm
Infrastructure biomaRt Infrastructure biomaRt
16.7 years ago Steffen ▴ 500
0
votes
0
replies
1.3k
views
biocep project - R for the Web and the Virtual R Workbench
Infrastructure PROcess Infrastructure PROcess
17.0 years ago kchine@ebi.ac.uk ▴ 10
0
votes
0
replies
707
views
question regarding lumiHumanV1SUMFUNC and lumiRatV1SUMFUNC in lumiHumanV1 and lumiRatV1, respectively
Annotation Infrastructure Cancer Annotation Infrastructure Cancer
17.2 years ago Seth Falcon ★ 7.4k
0
votes
0
replies
1.1k
views
2x2 factorial with dye effect, limma design
Microarray Infrastructure Microarray Infrastructure
17.8 years ago Gordon Smyth 51k
0
votes
0
replies
1.4k
views
BioC 1.9 is released!
BiocViews SNP Microarray Annotation Normalization Visualization Network Infrastructure SNP
18.1 years ago Seth Falcon ★ 7.4k
0
votes
1
reply
1.2k
views
Newbie 'rflowcyt' question; problem loading facscan256.fcs
Survival Infrastructure Cancer hexbin prada rfcdmin rflowcyt Survival Infrastructure
updated 18.5 years ago by ★ 7.4k • written 18.4 years ago by ▴ 80
0
votes
5
replies
1.9k
views
extracting interactions between members of the KEGG pathways
Pathways Infrastructure Cancer graph Pathways Infrastructure Cancer graph
updated 18.7 years ago by ★ 5.5k • written 18.7 years ago by ▴ 90
50 results • Page 1 of 1
Recent ...
Replies
Comment: GOstats kegg analysis in wheat - help - none of the objects in the first column by GV Yoshikawa • 0
Thank you for the reply. I tried swapping columns before asking, it made no difference. head(keggframeData) path_id kegg…
Answer: Differential Expression Analysis with unbalanced batches without replication bet by Gordon Smyth 51k
> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
Comment: BiomaRt Possible Ensembl SSL connectivity problems detected. by Adam • 0
I just found this workaround: httr::set_config(config(ssl_verifypeer = FALSE, ssl_verifyhost = FALSE)) at [this Stack Overflow link][…
Comment: Problem at champ.load by icecreamlover • 0
Hello! Were you able to figure this out? I am running into the same error!
Comment: ChAMP - obtaining beta values using EPICv2 annotation by icecreamlover • 0
Hello, Were you able to fix the error? I used the same document and I am running into the same error. I am curious if you have any feedba…
Votes
A: Up/Down Regulated GeneList from edgeR and R
A: Up/Down Regulated GeneList from edgeR and R
A: Down/Up-regulated genes asymmetry in edgeR differential expression analysis
Answer: Combining RNAseq and microarray data using edgeR/limma-voom
Answer: How do I merge a list of GRanges?
Awards • All
Teacher to Gordon Smyth 51k
Popular Question to Guido Hooiveld ★ 4.1k
Popular Question to shepherl 4.1k
Supporter to Paul Harrison ▴ 100
Popular Question to Mikhail Dozmorov ▴ 30
Locations • All
United States, just now
France, 13 minutes ago
Australia, 39 minutes ago
WEHI, Melbourne, Australia, 49 minutes ago
The city by the bay, 1 hour ago
Traffic: 684 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6