Bioconductor Limma-voom

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limma limma-voom limma paired analysis limma contrast matrix

updated 7.1 years ago by Aaron Lun ★ 28k • written 7.1 years ago by gregory.l.stone ▴ 10

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2.6k

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edger limma-voom paired samples

7.6 years ago aec ▴ 90

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2.1k

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limma-voom design matrix limma time-course limma design matrix limma

6.2 years ago • updated 6.1 years ago SPbeginner • 0

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1.7k

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limma-voom voom limma rna-seq

updated 6.5 years ago by Aaron Lun ★ 28k • written 6.5 years ago by vd4mmind • 0

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1.8k

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rna-seq time series patient limma-voom

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.6 years ago by aec ▴ 90

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limma limma-voom

updated 12 months ago by blackdesgin • 0 • written 6.1 years ago by SPbeginner • 0

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2.5k

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limma-voom sva duplicatecorrelation

updated 6.8 years ago by sina.nassiri ▴ 130 • written 6.8 years ago by aec ▴ 90

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limma limma-voom limma design matrix confounders

updated 5.9 years ago by Aaron Lun ★ 28k • written 5.9 years ago by S.Bamopoulos ▴ 10

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normalization sva limma-voom

updated 6.8 years ago by Gordon Smyth 50k • written 6.8 years ago by aec ▴ 90

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952

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variancePa variancePartition limma-voom dream

updated 14 months ago by Gordon Smyth 50k • written 14 months ago by Le • 0

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1.4k

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limma-voom rnaseq differential gene expression

7.6 years ago Javier Gutierrez-Achury • 0

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limma limma design matrix limma contrast matrix limma paired analysis limma-voom

updated 7.2 years ago by Gordon Smyth 50k • written 7.2 years ago by gregory.l.stone ▴ 10

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2.5k

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limma-voom duplicatecorrelation random effects

updated 5.5 years ago by Gordon Smyth 50k • written 5.5 years ago by tcalvo ▴ 90

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882

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limma limma-trend limma-voom

updated 3 months ago by floriandeckert ▴ 30 • written 17 months ago by hainct • 0

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limma-voom deseq2 EdgeR

updated 5.5 years ago by Steve Lianoglou ★ 13k • written 5.5 years ago by Raymond ▴ 20

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1.6k

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deseq2 limma voom limma-voom rnaseq

updated 5.4 years ago by Gordon Smyth 50k • written 5.4 years ago by bharata1803 ▴ 60

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salmon tximport limma-voom

updated 6.6 years ago by Michael Love 41k • written 6.6 years ago by Sandip Darji ▴ 30

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1.9k

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limma limma-voom

updated 6.1 years ago by Gordon Smyth 50k • written 6.1 years ago by Peter Langfelder ★ 3.0k

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4.8k

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voom limma-voom tximport edger

updated 7.1 years ago by Ryan C. Thompson ★ 7.9k • written 7.1 years ago by johnmcma ▴ 10

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1.2k

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limma limma-voom goseq

updated 6.3 years ago by Gordon Smyth 50k • written 6.3 years ago by joelrosa • 0

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limma-voom rnaseq normalization

6.3 years ago bilcodygm • 0

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905

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limma limma-voom StatisticalMethod

updated 15 months ago by Gordon Smyth 50k • written 15 months ago by jay • 0

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quantile normalization limma-voom

updated 6.2 years ago by Gordon Smyth 50k • written 6.2 years ago by bilcodygm • 0

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rnaseq limma limma-voom Tutorial

updated 7.1 years ago by Aaron Lun ★ 28k • written 7.1 years ago by icxa0409 • 0

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edger limma-voom voom

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by gregory.l.stone ▴ 10

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1.2k

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rnaseq edger limma-voom

updated 6.3 years ago by Michael Love 41k • written 6.3 years ago by bilcodygm • 0

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1.7k

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limma limma-voom

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by gregory.l.stone ▴ 10

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634

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limma-voom smooth-quantile-normalization quantro

22 months ago raf4 ▴ 20

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1.3k

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limma limma-voom rnaseq voom

updated 2.6 years ago by Gordon Smyth 50k • written 2.6 years ago by taur.vil • 0

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1.3k

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limma edger voom voomWithQualityWeights limma-voom

updated 6.4 years ago by Gordon Smyth 50k • written 6.4 years ago by Guido Hooiveld ★ 3.9k

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4.1k

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voom limma-voom voomwithqualityweights rna-seq

updated 6.2 years ago by Matthew Ritchie ▴ 1000 • written 6.2 years ago by anne.biton ▴ 20

31 results • Page 1 of 1

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Answer: DESeq2 v1.35.0 by Michael Love 41k

That is not a release (odd 'y' digit). See Bioconductor help pages: https://contributions.bioconductor.org/description.html#description-ver…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by James W. MacDonald 65k

Please don't piggyback on posts from 2.3 years ago. If you have a question, post as a new question.

Answer: DESeq2 v1.35.0 by James W. MacDonald 65k

Odd release versions indicate a devel version, which upon release is incremented to the next even version, so you won't be able to find tha…

Comment: Although I successfully installed the package "simpleaffy'' , I cannot library i by fatinataly • 0

I tried also with oligo does not work, any other suggestion?

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

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A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

SPIA plotP giving error

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Popular Question to rohitsatyam102 ▴ 20