Showing : onechannelgui • reset
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News: Initial List of Deprecated Packages for Bioc3.6
deprecate EWCE MAIT stepwiseCM onechannelgui News
6.8 years ago shepherl 3.9k
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3
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problem with oneChannelGUI
onechannelgui exon array analysis R
8.6 years ago anna.dolnik • 0
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3
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How to combine expression values of multiple probes for one gene
probe convert geneexpression onechannelgui
updated 8.9 years ago by ▴ 830 • written 8.9 years ago by ▴ 10
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News: RNAseq data analysis courses: Torino (Italy) : Beginner course March 17-19 2015 & Advance Course April 14-16 2015
rnaseq mirna onechannelgui chimera News
9.4 years ago raffaele calogero ▴ 500
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oneChannelGUI - setting APT tools folder
software error microarray onechannelgui
9.6 years ago nextgenseq.bioinfo • 0
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Introductory workshop for RNA-seq 27-28 March 2013, Torino, Italy
Network oneChannelGUI Network oneChannelGUI
11.3 years ago raffaele calogero ▴ 500
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problems with oneChannelGUI
affylmGUI oneChannelGUI ASSIGN affylmGUI oneChannelGUI ASSIGN
12.2 years ago Manuela Di Russo ▴ 70
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1.0k
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Basic question about GENE 1.0 ST
biomaRt oneChannelGUI biomaRt oneChannelGUI
updated 12.4 years ago by ▴ 60 • written 12.4 years ago by ▴ 200
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conditions to apply BH correction
oneChannelGUI oneChannelGUI
updated 13.0 years ago by ▴ 70 • written 13.0 years ago by ▴ 10
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reply
974
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Problem with oneChannelGUI
oneChannelGUI oneChannelGUI
updated 13.2 years ago by ▴ 200 • written 13.2 years ago by ▴ 500
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1.0k
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Problem with oneChannelGUI
oneChannelGUI oneChannelGUI
updated 13.2 years ago by 25k • written 13.2 years ago by ▴ 200
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1.1k
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Problems running oneChannelGUI
probe oneChannelGUI probe oneChannelGUI
updated 13.5 years ago by ▴ 910 • written 13.5 years ago by ▴ 200
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1.9k
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oneChannelGUI
Rgraphviz affylmGUI oneChannelGUI Rgraphviz affylmGUI oneChannelGUI
updated 13.5 years ago by ▴ 500 • written 13.5 years ago by ▴ 200
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annotations of Human Gene 1.0 ST microarray and oneChannelGUI
Microarray Normalization probe oneChannelGUI Microarray Normalization probe oneChannelGUI
13.7 years ago rcaloger ▴ 500
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annotations of Human Gene 1.0 ST microarray and oneChannelGUI
Microarray Normalization GO probe oneChannelGUI Microarray Normalization GO probe
13.8 years ago ifig319@ifi.csic.es ▴ 10
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Different result from gcrma function by using command line gcrma, affylmGUI and oneChannelGUI.
gcrma affylmGUI oneChannelGUI gcrma affylmGUI oneChannelGUI
13.8 years ago Lin Ying ▴ 10
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1.6k
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oneChannelGUI and Affymetrix 1.0 ST arrays
GO probe oneChannelGUI GO probe oneChannelGUI
updated 14.0 years ago by ▴ 500 • written 14.0 years ago by ▴ 280
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Difficulty installing oneChannelGUI in Vista
Cancer affylmGUI oneChannelGUI Cancer affylmGUI oneChannelGUI
updated 14.0 years ago by 66k • written 14.0 years ago by ★ 2.0k
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Exon array annotation with limma?
Annotation oneChannelGUI Annotation oneChannelGUI
14.4 years ago Michael Imbeault ▴ 220
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2.2k
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Exon array annotation with limma?
Normalization limma biomaRt oneChannelGUI Normalization limma biomaRt oneChannelGUI
updated 14.4 years ago by ▴ 500 • written 14.4 years ago by ▴ 220
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different normalized results using oneChannelGUI, and oligo packages
Normalization limma oligo oneChannelGUI Normalization limma oligo oneChannelGUI
updated 14.5 years ago by ★ 4.3k • written 14.5 years ago by ▴ 500
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1.3k
views
different normalized results using oneChannelGUI and oligo packages
GO limma oligo oneChannelGUI GO limma oligo oneChannelGUI
updated 14.5 years ago by ★ 4.3k • written 14.5 years ago by ▴ 840
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975
views
export contrast results in OneChannelGUI
limma oneChannelGUI limma oneChannelGUI
updated 14.6 years ago by ▴ 500 • written 14.6 years ago by ▴ 840
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Analysing Human Gene ST 1.0 Arrays with oligo and, oneChannelGUI yield different number of probesets
Preprocessing oneChannelGUI Preprocessing oneChannelGUI
14.6 years ago rcaloger ▴ 500
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5
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2.2k
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Analysing Human Gene ST 1.0 Arrays with oligo and oneChannelGUI yield different number of probesets
Preprocessing cdf oligo oneChannelGUI Preprocessing cdf oligo oneChannelGUI
updated 14.6 years ago by ★ 4.3k • written 14.6 years ago by ▴ 840
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Question about inspecting splices indexes
Organism probe oneChannelGUI Organism probe oneChannelGUI
14.9 years ago raffaele calogero ▴ 500
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1.1k
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Question about inspecting splices indexes (oneChannelGUI)
oneChannelGUI oneChannelGUI
14.9 years ago Guido Leoni ▴ 20
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935
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onechannelGUI error
probe oneChannelGUI probe oneChannelGUI
15.0 years ago rcaloger ▴ 500
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849
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onechannelGUI error,
probe oneChannelGUI probe oneChannelGUI
15.0 years ago PJARES@clinic.ub.es ▴ 30
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1.7k
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BioStrings questions
probe oneChannelGUI probe oneChannelGUI
15.6 years ago rcaloger ▴ 500
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1.2k
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Problem with oneChannelGUI
GUI Biobase affy affyio oneChannelGUI preprocessCore GUI Biobase affy affyio
15.9 years ago Luc Vallieres ▴ 20
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1.2k
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oneChannelGUI and hugene10stv1cdf
oneChannelGUI oneChannelGUI
updated 16.0 years ago by ▴ 500 • written 16.0 years ago by ▴ 280
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1.1k
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oneChannelGUI problem
graph oneChannelGUI graph oneChannelGUI
updated 16.3 years ago by ▴ 500 • written 16.3 years ago by ▴ 320
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723
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Errors in importing cel files into oneChannelGUI
probe oneChannelGUI probe oneChannelGUI
16.6 years ago Ester Feldmesser ▴ 60
34 results • Page 1 of 1
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Comment: Volcano plot of scRNA-seq data not "centered" by ATpoint ★ 4.2k
My comment was generic. If your experiment causes drastic shifts then the situation might be different. The advise is the same: Try to use …
Comment: conumee with Infinium MethylationEPIC v2.0 by Maximus • 0
Hi Sole, If there is a combined mixture of MSet of 450K, EPIC and EPICv2, how should I create an annotation object? I tried to create anno…
Comment: Volcano plot of scRNA-seq data not "centered" by tjl • 0
Thank you both. The code is below, simplified a bit for simplicity. ATpoint, your suggestion re: the top 20% of genes by baseMean makes me …
Comment: Cannot install oligo on Fedora by James W. MacDonald 66k
Wait a minute. The `oligo` package is *supposed to* be using `zlibbioc`, but apparently it is not. I get the same thing as you do, where it…
Comment: Cannot install oligo on Fedora by James W. MacDonald 66k
There is the `zlibbioc` package that provides the headers for zlib 1.2.5, that I think you should be able to use, although that would requi…
Votes
DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol
DESeq2 swap ensembl gene id rownames with gene symbol column
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
DESeq2: add annotations (from data frame) to DESeqDataSet
Add new columns to DESeqResults from text file by matching rownames.
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