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package
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0
votes
1
reply
1.8k
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ChAMP package library loading error
methylation
package
9.3 years ago
sdeshpande
• 0
0
votes
1
reply
1.0k
views
I want to submit a package to Bioconductor by Github. But it always comes out an inexplicable problems
package
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
taosheng.x
• 0
1
vote
2
replies
1.5k
views
New package version submission
package
submit package
package updates
9.4 years ago
francescodc87
• 0
6
votes
0
replies
1.4k
views
News:
New Package Submission Process
news
package
submit package
News
updated 9.4 years ago by
Martin Morgan
25k • written 9.4 years ago by
Valerie Obenchain
★ 6.8k
4
votes
3
replies
3.4k
views
Is there an R package providing an R API for IGV / igvtools out there?
package
IGV
updated 9.7 years ago by
Paul Shannon
▴ 470 • written 9.7 years ago by
Henrik Bengtsson
★ 2.4k
13
votes
1
reply
3.4k
views
News:
Updated Bioconductor Package Submission Policy
package
submission
News
9.8 years ago
Martin Morgan
25k
0
votes
2
replies
1.6k
views
R package for molecule interactions?
r
package
function
interactions
10.0 years ago
amyfm
▴ 10
1
vote
6
replies
3.0k
views
Detect short tandem repetitions from bam file
bam
short tandem repetitions
package
10.1 years ago • updated 10.0 years ago
Pau Marc Muñoz Torres
▴ 20
2
votes
3
replies
3.5k
views
package for sex determination using sam/bam files
software
sex
package
10.1 years ago
Pau Marc Muñoz Torres
▴ 20
0
votes
3
replies
3.0k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
10.1 years ago
Miguel Juliá
• 0
0
votes
4
replies
4.0k
views
Biostrings throwing error
biostrings
installation
package
keepNA
updated 10.3 years ago by
James W. MacDonald
68k • written 10.3 years ago by
prim-and-proper
• 0
2
votes
2
replies
6.9k
views
package install issue (ubuntu 14.04, R 3.2.1)
package
installation
10.3 years ago
doublehelixlf
▴ 10
0
votes
0
replies
1.2k
views
CNTools package lead R to abort
CNTools
package
10.4 years ago
sircoulombf
• 0
0
votes
2
replies
1.1k
views
Update a package in a older relase
package
updated 10.4 years ago by
James W. MacDonald
68k • written 10.4 years ago by
gobbi.andrea
• 0
0
votes
1
reply
2.3k
views
Graph viewer for Reactome Pathways
bioconductor
package
reactome
graph
updated 10.4 years ago by
Johannes Rainer
★ 2.1k • written 10.4 years ago by
Deepak Tanwar
▴ 10
5
votes
3
replies
2.1k
views
BiocCheck: REQUIRED: vignette sources in vignettes/ directory (for custom vignettebuilder)
package
bioconductor
bioc-devel
developers
10.5 years ago
flying-sheep
▴ 10
2
votes
1
reply
9.6k
views
Problems to install a package - Ubuntu
ubuntu
package
installation
varianttools
updated 10.5 years ago by
James W. MacDonald
68k • written 10.5 years ago by
lelemraposo
▴ 10
0
votes
2
replies
4.8k
views
package ‘ComplexHeatmap’ is not available
software error
package
updated 10.6 years ago by
Guangchuang Yu
★ 1.2k • written 10.6 years ago by
duygu.ozcelik
• 0
1
vote
3
replies
2.3k
views
question about the EdgeR package: additive models and blocking
package
updated 10.6 years ago by
Gordon Smyth
53k • written 10.6 years ago by
Fix Ace
▴ 100
0
votes
3
replies
2.6k
views
Affymetrix ReadAffy() can't read my CEL file
microarray
affy
cancer
hgu133plus2
package
updated 10.7 years ago by
James W. MacDonald
68k • written 10.7 years ago by
kanacska
▴ 10
1
vote
2
replies
1.6k
views
How to build a non "gene-centered" annotation package using SQLForge ?
annotation
package
custom
microarray
10.8 years ago
becker.jeremie
• 0
2
votes
5
replies
2.0k
views
Submitting R packages with external data
package
updated 10.8 years ago by
Andrzej Oleś
▴ 750 • written 10.8 years ago by
vittorio.fortino
• 0
9
votes
6
replies
2.2k
views
package specifically dedicated to a manuscript
package
guidelines
10.8 years ago
petyuk
▴ 70
1
vote
3
replies
1.3k
views
new submission : waiting duration
package
10.9 years ago
kmezhoud
▴ 10
74 results • Page
2 of 2
Recent ...
Replies
Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction
by
Kevin Blighe
★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Answer: Streamlining the computing time for MiloDE p-value correction in large dataset?
by
Kevin Blighe
★ 4.0k
Hi Joseph, I agree with ATpoint's suggestion that pseudobulk aggregation (e.g., via aggregateData in scran or similar) would likely be far…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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shepherl
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James W. MacDonald
68k
Popular Question
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Daniel Cameron
▴ 40
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Peter Hickey
▴ 760
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edward.esiribloom
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