Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
results
•
reset
1
vote
1
reply
1.1k
views
HISAT2 mapping
hisat2
results
updated 2.6 years ago by
ATpoint
★ 5.0k • written 2.6 years ago by
ali
• 0
0
votes
1
reply
4.3k
views
Heatmap with result DESeq analysis
DESeq2
results
Heatmaps
plots
updated 3.1 years ago by
Michael Love
43k • written 3.1 years ago by
Chiara
• 0
1
vote
2
replies
3.8k
views
error in DESeq2 results(dds)
DESeq2
datasetfrommatrix
results
error
4.7 years ago
james
• 0
3
votes
6
replies
3.3k
views
DESEq2 - How to extract ONE results table/coefficient from the DESeqResults object
deseq2
results
DESeqResults
updated 5.2 years ago by
Michael Love
43k • written 5.2 years ago by
paula.vaccarello
• 0
2
votes
2
replies
1.2k
views
DESeq results gives all genes
deseq2
design matrix
results
updated 7.0 years ago by
Michael Love
43k • written 7.0 years ago by
evocanres
• 0
0
votes
1
reply
1.3k
views
Basemean always multiples of 0.5 in deseq2 results
deseq
results
baseMean
updated 7.3 years ago by
Michael Love
43k • written 7.3 years ago by
batmaiden
• 0
0
votes
3
replies
1.4k
views
A contrast with four simultaneous conditions for DESeq2?
DESeq2
contrast
results
updated 7.4 years ago by
Michael Love
43k • written 7.4 years ago by
jan.soderman
• 0
1
vote
3
replies
1.5k
views
Results counts post DESeq same raw counts
DESeq2
results
updated 7.6 years ago by
Michael Love
43k • written 7.6 years ago by
A
▴ 60
0
votes
0
replies
1.1k
views
[Questions about the results of the enrichGo()]More genes are involved but less biological activity.
enrichGO()
results
7.6 years ago
414457044
• 0
0
votes
5
replies
1.8k
views
results {DESeq2} parameters
deseq2
results
updated 7.7 years ago by
Michael Love
43k • written 7.7 years ago by
Aurora
▴ 20
2
votes
5
replies
2.0k
views
DEGs generation parameters and specificities
deseq2
results
design and contrast matrix
updated 8.0 years ago by
Michael Love
43k • written 8.6 years ago by
tarun2
• 0
2
votes
4
replies
1.8k
views
Tac and Bioconductor giving different results
Tac
bioconductor
results
reproducbiltiy
updated 8.0 years ago by
Steve Lianoglou
★ 13k • written 8.0 years ago by
kritikamish99
▴ 10
3
votes
2
replies
4.5k
views
results(dds) error: couldn't find results. you should first run DESeq()
deseq2
results
error
8.1 years ago
hs.lansdell
▴ 20
2
votes
8
replies
1.9k
views
Deseq2 result for a variable
deseq2
differential expression
results
updated 8.1 years ago by
Michael Love
43k • written 8.1 years ago by
yoursbassanio
▴ 10
2
votes
5
replies
6.3k
views
DESEQ2 'results' filter by value for multiple conditions (contrast off?)
deseq2
results
contrast
padj
updated 8.4 years ago by
Michael Love
43k • written 8.4 years ago by
courtney.stairs
• 0
2
votes
5
replies
4.7k
views
Limma toptable interpretation check
limma
microarray
fdr
p-value
results
updated 8.5 years ago by
Aaron Lun
★ 29k • written 8.5 years ago by
bhgyu
▴ 30
1
vote
6
replies
2.5k
views
DESeq2: relevel contrasts after DESeq() has been called (time-course experiment of Drosophila development)
drosophila melanogaster
multiple time points
deseq2
results
development
updated 8.7 years ago by
Michael Love
43k • written 8.7 years ago by
wariobrega
• 0
4
votes
4
replies
2.4k
views
Deseq2 results interpretation
deseq2
multiple factor design
results
9.5 years ago
koeniger
▴ 10
5
votes
6
replies
18k
views
Group comparison in DESeq2
deseq2
results
updated 10.2 years ago by
Michael Love
43k • written 10.2 years ago by
jjinhyoungkim
▴ 20
6
votes
2
replies
5.5k
views
All same padj of contrast results in the DESeq2
deseq2
padj
contrast
results
updated 10.3 years ago by
Michael Love
43k • written 10.3 years ago by
jjinhyoungkim
▴ 20
0
votes
3
replies
2.5k
views
Getting different results with DESeq2
deseq2
results
rstudio
updated 10.3 years ago by
Michael Love
43k • written 10.3 years ago by
Lillyhchen
▴ 10
5
votes
4
replies
3.9k
views
limma multiple rows per gene in output (write.fit)
limma
results
10.4 years ago
Anne
• 0
2
votes
15
replies
4.3k
views
BiSeq trimClusters FDR.loc confusion
biseq
fdr
data
results
10.6 years ago • updated 10.5 years ago
mnaymik
▴ 10
23 results • Page
1 of 1
Recent ...
Replies
Comment: Alternative to BrainArray custom CDF packages for Affymetrix chips?
by
insuraasanaa3scetaxrealty
• 0
Lamento que el acceso a los paquetes BrainArray esté fallando; cuando ocurren estos problemas, es util contar con recursos alternativos bie…
Comment: Getting a large intercept with DESeq2
by
Denise
• 0
Hi, Thank you very much, James and Michael, for getting back to me! I noticed the large intercept when plotting the coefficients returned …
Comment: Error installing Seqinfo
by
shepherl
4.2k
Yes and we are working on getting the updated windows binaries distributed asap! We are hopeful by the end of this week
Comment: APAlyzer
by
shepherl
4.2k
We apologize for their unresponsiveness; you could try posting your question here to see if anyone in the community could assist in the me…
Answer: Error installing Seqinfo
by
fabio.marroni
• 0
I am answering my own question. I found the solution thanks to [this post][1], and I am writing here the very simple procedure: 1) Instal…
Votes
Answer: replace cat with message in glmTreat when lfc = 0
Answer: replace cat with message in glmTreat when lfc = 0
Comment: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Answer: Issues with downloading biomaRt - SeqInfo and S4 Vectors
Awards
• All
Scholar
to
Gordon Smyth
53k
Popular Question
to
James W. MacDonald
68k
Popular Question
to
anjanaram1
▴ 10
Popular Question
to
Stephen Piccolo
▴ 600
Popular Question
to
Maria Doyle
▴ 100
Locations
• All
WEHI, Melbourne, Australia,
20 minutes ago
The city by the bay,
23 minutes ago
USA, Los Angeles, USC,
1 hour ago
United States,
1 hour ago
United States,
1 hour ago
Traffic: 970 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6