Showing : software error • reset
0
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2
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1.8k
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Error during installation of GEOquery package (R 4.0.3, Bioconduct 3.11)
software error GEOquery
updated 3.5 years ago by 1.6k • written 3.5 years ago by • 0
0
votes
0
replies
774
views
flowCore: gives a "emptyValue" error when / is used as an escape character in .fcs file metadata
software error
3.6 years ago andrea.mcewan • 0
0
votes
1
reply
1.5k
views
Error: Unable to establish connection with R session
software error
updated 3.6 years ago by 1.6k • written 3.6 years ago by • 0
0
votes
2
replies
785
views
DepMap copy number
software error depmap
updated 3.0 years ago by • 0 • written 3.6 years ago by • 0
0
votes
4
replies
1.6k
views
Error in GSVA: Error in dimnames(x) <- dn
software error
3.6 years ago ElaM • 0
4
votes
5
replies
2.1k
views
how to get exons of multiple genes
software error
3.6 years ago pegah.taklifi ▴ 30
0
votes
4
replies
1.2k
views
Viper error while creating Regulon object from minet adjacency matrix file ?
software error
updated 19 months ago by • 0 • written 3.6 years ago by • 0
0
votes
1
reply
790
views
Vignette Run Time
software error
updated 3.6 years ago by 25k • written 3.6 years ago by ▴ 10
3
votes
2
replies
1.7k
views
Failed to install 'MetaboAnalystR' from GitHub
software error MetaboAnalystR mzR
updated 3.6 years ago by 1.6k • written 3.6 years ago by • 0
0
votes
0
replies
676
views
vcountPDict Out-of-Memory Errors
software error Biostrings
3.6 years ago jennyl.smith12 • 0
0
votes
4
replies
3.7k
views
DESeq2 installation in R
software error
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
1
vote
1
reply
1.3k
views
Error with view.molecule.2d function in rcdk
software error rcdk view.molecule.2d ViewMolecule2DTable
updated 3.6 years ago by ★ 3.9k • written 3.6 years ago by • 0
0
votes
2
replies
1.4k
views
Error in installing org.Hs.eg.db
software error org.Hs.eg.db win10
updated 3.6 years ago by 25k • written 3.6 years ago by • 0
3
votes
12
replies
2.5k
views
DESeq2 Installation Errors
deseq2 software error
updated 20 months ago by • 0 • written 3.6 years ago by • 0
0
votes
2
replies
1.3k
views
Error in installing ChemmineOB
software error ChemmineOB rand.h macOS
updated 3.6 years ago by • 0 • written 3.6 years ago by • 0
3
votes
3
replies
20k
views
Unable to install nloptr
software error
updated 3.1 years ago by ▴ 10 • written 3.6 years ago by • 0
0
votes
3
replies
1.5k
views
Error in Forge the target package (BSgenome)
software error BSgenome
3.7 years ago • updated 3.5 years ago jiazhou0116 • 0
1
vote
2
replies
885
views
error in forgeBSgenomeDataPkg
software error
updated 3.7 years ago by 65k • written 3.7 years ago by • 0
1
vote
1
reply
972
views
About generating a seed file (DCF format) for forging a BSgenome
software error BSgenome
updated 3.6 years ago by 16k • written 3.7 years ago by • 0
2
votes
3
replies
1.1k
views
Error in topGO analysis
software error topGO go
updated 3.7 years ago by ★ 3.9k • written 3.7 years ago by • 0
0
votes
3
replies
1.1k
views
Use xcms but mzR occurs error
software error xcms
updated 3.7 years ago by ★ 3.9k • written 3.7 years ago by • 0
2
votes
2
replies
1.8k
views
BiocParallel : unable to find an inherited method for function 'bplapply' for signature '"integer", "call"'
software error
updated 3.7 years ago by 25k • written 3.7 years ago by ▴ 140
0
votes
4
replies
1.4k
views
Error with xcms - requiring MSnbase 2.15.3 but not installing
software error xcms MSnbase
updated 3.7 years ago by 1.6k • written 3.7 years ago by • 0
7
votes
2
replies
4.4k
views
Help in installing certain pacakges
software error install
updated 3.7 years ago by 25k • written 3.7 years ago by ▴ 40
0
votes
3
replies
1.4k
views
Unable to install ffbase
software error
updated 3.7 years ago by 25k • written 3.7 years ago by • 0
5
votes
4
replies
1.9k
views
DESeq2 question about use of DESeqDataSetFromTximport() from RSEM data
deseq2 software error
updated 3.8 years ago by 41k • written 3.8 years ago by ▴ 10
1
vote
6
replies
3.2k
views
DEP package: Problems installing on macOS
software error DEP proteomics
updated 3.8 years ago by 1.6k • written 3.8 years ago by • 0
0
votes
0
replies
595
views
Dispersions Error in DEXSEQ
software error
3.8 years ago huck.thornton ▴ 10
0
votes
3
replies
1.3k
views
Cant update old packages
software error packages update
updated 3.8 years ago by 65k • written 3.8 years ago by • 0
4
votes
5
replies
1.4k
views
Installing DESeq2 fails ; R can't find basic commands like 'rm' and 'mv'
deseq2 install software error
3.8 years ago mja18 ▴ 40
0
votes
0
replies
631
views
makeBSseqData problem versions
software error
updated 3.8 years ago by 3.9k • written 3.8 years ago by • 0
8
votes
8
replies
2.6k
views
msa compilation failure - multiple definition of `GC_jmp_buf' in gc-7.2
software error msa
updated 2.5 years ago by ▴ 290 • written 3.8 years ago by ▴ 40
0
votes
0
replies
1.4k
views
In serialize(data, node$con)
software error
3.8 years ago thomas.boegl • 0
1
vote
4
replies
1.4k
views
Question: org.Hs.eg.db can not be downloaded
software error
3.8 years ago liuzhizheng1996 • 0
0
votes
0
replies
629
views
Error in data.frame(ASSIGN = "ASSIGN parameters", version = as.character(utils::packageVersion("ASSIGN")), : arguments imply differing number of …
software error assign
3.8 years ago yueli7 ▴ 20
1
vote
7
replies
1.3k
views
Question:Error installing BiocManager::install("org.Hs.eg.db") package.
software error
updated 3.8 years ago by ★ 3.9k • written 3.8 years ago by • 0
6
votes
5
replies
864
views
Security process for Bioconductor
software error
updated 3.8 years ago by 25k • written 3.8 years ago by ▴ 30
0
votes
2
replies
22k
views
Installing EnhancedVolcano package in R
microarray software error
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by • 0
0
votes
4
replies
3.9k
views
ggplot2 of PCA
software error ggplot2
updated 3.9 years ago by • 0 • written 3.9 years ago by ▴ 20
4
votes
4
replies
6.4k
views
plotPCA in DESeq2
software error deseq2
3.9 years ago yueli7 ▴ 20
5
votes
11
replies
1.6k
views
Rsubread: change in behavior when accepting mixed paired end and single end files
software error Rsubread
updated 3.9 years ago by 50k • written 3.9 years ago by • 0
2
votes
20
replies
2.7k
views
plotPCA in DESeq2
software error deseq2
3.9 years ago yueli7 ▴ 20
2
votes
2
replies
873
views
biomart webservice error when using data from Phytozome
software error go
3.9 years ago e.lopez-cortegano • 0
0
votes
4
replies
750
views
DEXSEQ error (no counts falling in this gene, there is nothing to plot).
software error
updated 3.9 years ago by ★ 3.9k • written 3.9 years ago by ▴ 10
0
votes
0
replies
592
views
The error when using "coMET" package
software error annotation
3.9 years ago yueli.yao • 0
0
votes
3
replies
488
views
DEXSEQ error (subscript out of boundsflattenedFile)
software error
3.9 years ago huck.thornton ▴ 10
2
votes
1
reply
842
views
bioCLite instalation failed
software error
3.9 years ago emily.biostats.1999 • 0
1
vote
2
replies
586
views
DEXSeq Illegal Strand Error
software error
3.9 years ago huck.thornton ▴ 10
0
votes
2
replies
946
views
GenomicFeatures load problem : "namespaceExport(ns, exports): undefined exports: %>%"
software error
updated 3.9 years ago by 25k • written 3.9 years ago by • 0
1
vote
1
reply
853
views
Error when installing edgeR and DESeq package
software error packages
updated 3.9 years ago by 65k • written 3.9 years ago by • 0
50 results • Page 1 of 1
Recent ...
Replies
Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k
Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p- by Gordon Smyth 50k
You have discovered something that I have pointed out many times on this forum. fgsea does not implement the classic GSEA method published …
Comment: Once again a "Model matrix not full rank" by James W. MacDonald 65k
In that case both time and treatment are identical things, so choose one and go with it.
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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