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R-devel - BiocGenerics - Warning: multiple methods tables found for which
BioGenerics
warning
3.9 years ago
ullrich
▴ 20
2
votes
8
replies
2.4k
views
DelayedArray loading Warning causes stop in Bioconductor 3.12
DelayedArray
warning
installation
updated 3.9 years ago by
Hervé Pagès
16k • written 3.9 years ago by
inzirio
▴ 10
5
votes
4
replies
1.3k
views
CMD check warning using Bioconductor as a source for the dependencies of an R package
Bioconductor
CMD check
warning
updated 5.2 years ago by
Martin Morgan
25k • written 5.2 years ago by
dong
▴ 10
0
votes
3
replies
972
views
PureCN warning: test.num.copy outside recommended range
PureCN
Warning
updated 6.0 years ago by
markus.riester
▴ 130 • written 6.0 years ago by
twtoal
▴ 10
3
votes
3
replies
2.0k
views
Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chunk
rmarkdown
suppressWarning
warning
updated 14 months ago by
Mike Smith
★ 6.5k • written 2.4 years ago by
Wolfgang Huber
★ 13k
6
votes
3
replies
2.6k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 6.5 years ago by
Lluís Revilla Sancho
▴ 730 • written 6.5 years ago by
Paul Brennan
▴ 10
0
votes
3
replies
2.5k
views
warning: example doesn't exist; while trying to build a package
bioconductor
package development
R
roxygen2
warning
6.5 years ago
clarisbaby
• 0
3
votes
2
replies
1.9k
views
DEXSeq throws a warning - rank-deficient matrix
dexseq
fit
matrix
warning
updated 2.5 years ago by
koushik
• 0 • written 7.2 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
1
reply
2.1k
views
reading text file in R
warning
text
read.delim
updated 6.8 years ago by
Gordon Smyth
50k • written 6.8 years ago by
niutster
• 0
2
votes
1
reply
1.2k
views
Warnings messages can not we handles/hidden
warning message
warning
R
rhdf5
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
matiasb
• 0
0
votes
1
reply
1.8k
views
makeTxdbfromUCSC Warning message
MakeTXDCfromUCSC
GenomicFeatures
warning
updated 8.7 years ago by
Marc Carlson
★ 7.2k • written 8.7 years ago by
Lillyhchen
▴ 10
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Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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