Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
0
votes
0
replies
951
views
[methylumi] concerning methylumi.bgcorr function and out-of-band intensities
methylumi
methylumi
11.4 years ago
Dylan Aïssi
▴ 30
0
votes
0
replies
869
views
Help for analysis a Factorial experiment
20.3 years ago
Marcelo Luiz de Laia
▴ 770
0
votes
1
reply
1.2k
views
Bioconductor Cloud AMI - How to Access Microarray Files Stored in Amazon S3 Buckets?
amazon
bioconductor aws
s3
oligo package
affybatch
6.1 years ago
perdedorium
• 0
0
votes
0
replies
198
views
Rain error: invalid annotation of time points
rain
10 weeks ago
mpuli011
• 0
0
votes
0
replies
760
views
Limma
17.5 years ago
Wayne Yu
▴ 10
0
votes
1
reply
985
views
Outlier Removal WGCNA
RNASeq
WGCNA
updated 2.4 years ago by
Vincent J. Carey, Jr.
6.7k • written 2.4 years ago by
jms2520
▴ 10
0
votes
0
replies
876
views
Do I now understand Limma contrast matrices??
19.7 years ago
Matthew Hannah
▴ 940
0
votes
0
replies
795
views
Re: "validity" of p-values
probe
probe
20.7 years ago
Gordon Smyth
50k
0
votes
0
replies
781
views
issue with the genegeneinteR to do the interaction of genes
snpstats::read
genegeneinteR
7.5 years ago
2313990450
• 0
0
votes
0
replies
1.1k
views
LIMMA makeContrasts(Groups[1]-Groups[2], levels = design) Error
limma
limma
19.3 years ago
Saurin D. Jani
▴ 360
1
vote
1
reply
585
views
r3cseq error with trimmed sequence as input
r3cseq
bam
trimmed
4.1 years ago
ch_el
▴ 10
0
votes
0
replies
967
views
Comparing human and mouse expression directly with RankProd
RankProd
RankProd
11.3 years ago
Cornwell, Adam
▴ 110
0
votes
0
replies
1.7k
views
Differential protein abundance testing using emPAI values?
proteomics
limma
7.8 years ago
Jenny Drnevich
★ 2.0k
0
votes
3
replies
2.9k
views
fgsea p-values are mostly the same upon analysis
fgsea
gsea
sc-rnaseq
5.8 years ago
atakanekiz
▴ 30
0
votes
0
replies
998
views
Bioconductor European Developers' Workshop, Manchester 2011
Proteomics
Cancer
Proteomics
Cancer
12.7 years ago
Crispin Miller
★ 1.1k
0
votes
0
replies
666
views
Fisher test in multtest
multtest
multtest
18.9 years ago
Pierre-Luc Brunelle
▴ 10
0
votes
3
replies
1.2k
views
Can't install packages due to '503 Service Unavailable'
glmGamPoi
BiocManager
updated 18 months ago by
Vincent J. Carey, Jr.
6.7k • written 18 months ago by
i.am.filippov
• 0
0
votes
0
replies
1.1k
views
Biclustering approach to make transcription modules for rna seq data
rnaseq
bicluster
trancription modules
eisa
isa
9.0 years ago
dhwani.dholakia
• 0
0
votes
0
replies
525
views
Economisez jusquà 41% sur votre voiture neuve
14.6 years ago
Auto IES via Effimail
▴ 70
0
votes
0
replies
445
views
Fwd: RE: p.adjust returns one uniform value
16.7 years ago
Jenny Drnevich
★ 2.2k
0
votes
0
replies
1.3k
views
baySeq issues
edgeR
baySeq
edgeR
baySeq
12.8 years ago
Iain Gallagher
▴ 930
0
votes
0
replies
835
views
Combining data from scans at different intensities
limma
aroma.light
limma
aroma.light
17.3 years ago
Gordon Smyth
50k
0
votes
2
replies
414
views
MAAPER
MAAPER
updated 21 months ago by
ATpoint
★ 4.1k • written 21 months ago by
Sasha
• 0
0
votes
1
reply
420
views
Mr. Anjan Payra
software error
4.8 years ago
anjan.payra
• 0
0
votes
0
replies
260
views
nondetects and technical replicates
qPCR
nondetects
6 months ago
Ed Siefker
▴ 230
0
votes
0
replies
882
views
Distance function and gene expression standardization for clustering
Clustering
Cancer
Clustering
Cancer
16.8 years ago
Serge Eifes
▴ 90
0
votes
0
replies
802
views
4-way venn diagram with ChIPpeakAnno
ChIPpeakAnno
ChIPpeakAnno
13.0 years ago
Julie Zhu
★ 4.3k
0
votes
0
replies
566
views
Plotting a line plot for genes across 4-species
RNAseq123
22 months ago
Mohamed
▴ 30
0
votes
0
replies
633
views
Position Available. Genomics Core
Genetics
Genetics
20.3 years ago
Michael McClelland
▴ 10
0
votes
0
replies
564
views
Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
22 months ago
Wolfgang Huber
★ 13k
0
votes
0
replies
948
views
xzfile() cannot open the connection, lzma encoder error 5.
clusterProfiler
clusterProfiler
10.9 years ago
Jose Guillen
▴ 10
0
votes
0
replies
672
views
marrayRaw class using read.Agilent function
probe
probe
16.7 years ago
jhs1jjm@leeds.ac.uk
▴ 230
0
votes
0
replies
430
views
references about the methods of normalization
limma
limma
18.9 years ago
NATALIA F TCHETCHERINA
▴ 60
0
votes
0
replies
525
views
Error while running ChAMP pipeline
champ.dmr
5.4 years ago
sinha.puja
▴ 10
0
votes
0
replies
802
views
RDAVIDWebService Package Official Gene Symbol IDs in GO Term Tables
RDAVIDWebService
Gene Ontology
GOTerm
biomaRt
3.8 years ago
ra711
• 0
0
votes
0
replies
717
views
Call for papers and participants on Next Generation Sequencing (CAMDA 2009)
Sequencing
Sequencing
14.8 years ago
Pan Du
★ 1.2k
0
votes
0
replies
647
views
Disabling aggregation with the option -r no, still combines genes into single “aggregate genes"
DEXSeq
2.9 years ago
n.tear
▴ 20
0
votes
1
reply
719
views
Query regarding WGCNA module formation
WGCNA
RNAseq
RNASeqData
updated 3.0 years ago by
Lluís Revilla Sancho
▴ 730 • written 3.0 years ago by
abhisek001
• 0
0
votes
1
reply
786
views
Biocparallel Error "Error: BiocParallel errors element index: 1, 2, 3 first error: unable to find an inherited method for function ‘bpbackend’ fo…
R
OUTRIDER
BiocParallel
updated 16 months ago by
Christian Mertes
• 0 • written 18 months ago by
me.achleitner
• 0
1
vote
5
replies
1.0k
views
How to analyze unannotated lncRNA using RNA-seq data?
rnaseq
7.6 years ago
xiaoyonf
• 0
0
votes
0
replies
487
views
bioinformatics position at Harvard Medical School
16.9 years ago
Wall, Dennis Paul
▴ 80
0
votes
0
replies
1.2k
views
PlotMA
Microarray
Cancer
Microarray
Cancer
19.8 years ago
James W. MacDonald
65k
0
votes
0
replies
925
views
Resend: altcdfenvs: mapping probes and creating new probe sets: guidance requested
cdf
probe
affy
altcdfenvs
cdf
probe
affy
altcdfenvs
12.9 years ago
Ariel Grostern
▴ 80
0
votes
0
replies
480
views
Subject= using beadarray to process iscan expression data - error using readIllumina()
10.6 years ago
Alan L Hutchison
▴ 10
0
votes
1
reply
1.0k
views
can't library hgu133plus2cdf
hgu133plus2cdf
4.2 years ago
1142985358
• 0
0
votes
0
replies
685
views
plot with two x-axis
12.4 years ago
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
905
views
Check out the eCard I sent you from Yahoo! Greetings
14.9 years ago
Jane Moore
▴ 10
0
votes
0
replies
440
views
Release 1.7 - Oligo package?
GO
oligo
GO
oligo
18.6 years ago
Seth Falcon
★ 7.4k
0
votes
0
replies
534
views
Dye swap and duplicate spots
18.9 years ago
lepalmer@notes.cc.sunysb.edu
▴ 40
0
votes
0
replies
524
views
Suggestion to geneplotter vignette
Annotation
geneplotter
Annotation
geneplotter
20.2 years ago
Palle Villesen
▴ 10
1,000 results • Page
1 of 20
Recent ...
Replies
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Awards
• All
Popular Question
to
euge.eugenio
▴ 20
Popular Question
to
Dario Strbenac
★ 1.5k
Popular Question
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Koen Van den Berge
▴ 180
Popular Question
to
shepherl
3.9k
Locations
• All
Belgium,
3 minutes ago
Slovakia,
5 minutes ago
United States,
33 minutes ago
United States,
45 minutes ago
Poland,
54 minutes ago
Traffic: 379 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6