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limma with interaction term
R biostatistics limma Epigenetics
10 months ago Jitendra ▴ 10
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4
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924
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limma design model for categorical variable
DNAMethylation limmaGUI biostatistics limma
updated 10 months ago by 52k • written 10 months ago by ▴ 10
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Job: Research Associate, statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
molecularQTL biostatistics computationalbiology GWAS
2.5 years ago helene.ruffieux • 0
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Job: Research Associate, computational/statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
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2.8 years ago helene.ruffieux • 0
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Job: Job opening - Data Scientist II - Fred Hutchinson Cancer Research Center
bioinformatics opening cancerresearch biostatistics research
2.8 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Post-Doctoral Research Fellow, Biostatistics - Seattle, WA
BIOSTATISTICS SEATTLE WASHINGTON COMPUTATIONAL BIOLOGY Job
4.6 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Data Sciences Statistician - Dana-Farber Cancer Institute
job data science biostatistics bioinformatics cancer Job
4.8 years ago Patrick Kimes ▴ 10
1
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995
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Job: Metabolomics Bioinformatics Postdoc Position at Steno Diabetes Center Copenhagen
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4.9 years ago Tommi Suvitaival ▴ 10
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Job: Post-Doctoral Research Fellow, Biostatistics, Bioinformatics and Computational Biology - Fred Hutchinson Cancer Research Center - Seattle, WA
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5.2 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
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5.4 years ago Michael Prummer • 0
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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
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5.7 years ago Patrick Kimes ▴ 10
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1.1k
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Job: Postdoctoral positions in drug discovery and genome data science
computational biology biostatistics big data data science drug discovery Job
5.8 years ago Thomas Girke ★ 1.7k
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Job: Biostatistics Analyst II - high throughput single-cell assays
biostatistics single-cell high throughput Job
5.9 years ago careers • 0
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819
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Job: Biostatistics Scientist II - high throughput single-cell assays
Biostatistics Job
5.9 years ago careers • 0
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Job: Data scientist postdoctoral position at Johns Hopkins
post-doc data science multimodal brain disorders biostatistics Job
5.9 years ago hjaarop1 • 0
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Job: Postdoctoral Position: Bioinformatics/data science
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6.0 years ago l.tomalin1987 • 0
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Job: PhD and PostDoc position in computational cancer biology in Milan
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6.1 years ago marschaefer • 0
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Job: Statistical Research Associate
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6.6 years ago Fred Hutch (Recruiting) ▴ 40
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1.4k
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
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6.7 years ago xzhousph • 0
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Job: APPLIED RESEARCH SCIENTIST II, Cancer Epidemiology dept., Moffitt Cancer Center, Tampa, FL
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6.8 years ago claudia.lopez-matamoros • 0
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Job: Bioinformatician/Biostatistician - Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Mainz, Germany
rnaseq biostatistics bioinformatician next-generation sequencing Job
6.9 years ago Federico Marini ▴ 180
2
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13
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3.3k
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DESeq2 and betaPrior
deseq2 biostatistics
7.3 years ago Elena Grassi ▴ 10
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1.4k
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
7.6 years ago hong.lee • 0
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1.5k
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News: May Institute Computation and statistics for mass spectrometry and proteomics
proteomics mass spectrometry biostatistics News
7.9 years ago Laurent Gatto 1.6k
1
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1.4k
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Job: (Bio-)Statistician at dkfz, Heidelberg, Germany
job biostatistics germany Job
8.1 years ago m.hummel ▴ 10
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1.6k
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Job: PhD student, Bioinformatician and Bioinformatic Data Manager positions in the areas of Bioinformatics and Biostatistics at the University Medical Cen…
bioinformatics biostatistics data management job Job
8.5 years ago • updated 8.4 years ago Frank Kramer ▴ 60
3
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1.7k
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Job: PhD Positions in Computational Cancer Research
jobs bioinformatics biostatistics cancer next-generation sequencing Job
8.6 years ago Bernd Fischer ▴ 550
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3
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1.7k
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Calculating a score from fold change matrix of pair-wise rna-seq data
rna-seq deseq2 differential gene expression biostatistics
8.7 years ago g.atla ▴ 10
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1.9k
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Job: Data scientist/bioinformatician - Paris
Genomics metabolomics biostatistics data integration Job
9.2 years ago David Enot ▴ 30
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2.1k
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Job: PhD student and post-doctoral position (computational, molecular medicine)
job biostatistics molecular medicine computational biology Job
9.5 years ago Simon Anders ★ 3.8k
30 results • Page 1 of 1
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Answer: Cross-validation with multiple control subgroups in limma by Gordon Smyth 52k
limma doesn't do cross-validation or resampling. Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Robert Castelo ★ 3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS by Aidan ▴ 60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Thanks for your reply!
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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