Bioconductor CPM

2

votes

2

replies

347

views

RNASeqPower removeBatchEffect cpm Batcheffect

12 weeks ago sukeshinik5 ▴ 20

5

votes

7

replies

1.6k

views

filtering RNA-Seq CPM edgeR filterByExpr

updated 19 months ago by Gordon Smyth 52k • written 19 months ago by mohammedtoufiq91 ▴ 10

3

votes

9

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2.5k

views

CPM filterByExpr edgeR design model.matrix

21 months ago • updated 20 months ago mohammedtoufiq91 ▴ 10

5

votes

6

replies

2.5k

views

CPM filterByExpr edgeR histogram rowsums

2.0 years ago mohammedtoufiq91 ▴ 10

2

votes

7

replies

1.9k

views

RUVSeq CPM Normalization

2.6 years ago Jess • 0

1

vote

1

reply

1.2k

views

DEGUST Normalization CPM

updated 3.3 years ago by James W. MacDonald 67k • written 3.3 years ago by Caroline • 0

0

votes

2

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3.7k

views

edger cpm rnaseq

4.3 years ago francesca3 • 0

0

votes

3

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939

views

RNA seq cpm

updated 4.7 years ago by Kevin Blighe ★ 4.0k • written 4.7 years ago by isabel.pieterse • 0

3

votes

2

replies

1.1k

views

diffbind CPM TMM

updated 4.8 years ago by Rory Stark ★ 5.2k • written 4.8 years ago by Guandong Shang ▴ 40

4

votes

5

replies

1.4k

views

deseq2 vst pca cpm

4.8 years ago svlachavas ▴ 840

1

vote

2

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1.0k

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rlog CPM RKPM

updated 5.0 years ago by Steve Lianoglou ★ 13k • written 5.0 years ago by zhang.jianhai ▴ 10

5

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7

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3.1k

views

edger removeBatchEffect cpm logCPM limma

5.6 years ago altintas.ali • 0

3

votes

2

replies

1.3k

views

edger limma cpm

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by b.nota ▴ 370

2

votes

4

replies

1.7k

views

edger cpm non-specific filtering rnaseq

updated 6.4 years ago by Gordon Smyth 52k • written 6.4 years ago by svlachavas ▴ 840

16

votes

6

replies

33k

views

edgeR cpm

updated 6.5 years ago by ftroot1010 ▴ 20 • written 6.7 years ago by jxb.dev ▴ 40

6

votes

14

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3.4k

views

rnaseq analysis variancestabilizingtransformation normalization cpm edger

updated 6.6 years ago by Wolfgang Huber ★ 13k • written 6.6 years ago by svlachavas ▴ 840

6

votes

2

replies

3.1k

views

edger cpm

updated 6.8 years ago by Aaron Lun ★ 28k • written 6.8 years ago by b.nota ▴ 370

3

votes

8

replies

1.7k

views

LRT CPM lowcountgenes deseq2

6.9 years ago A ▴ 40

0

votes

3

replies

1.5k

views

edgeR cpm edger fitted model explained variance

updated 6.9 years ago by Gordon Smyth 52k • written 6.9 years ago by alakatos ▴ 130

4

votes

11

replies

5.1k

views

edger independent filtering multiple factor design cpm

updated 7.2 years ago by Gordon Smyth 52k • written 7.2 years ago by teshome.dagnem • 0

3

votes

9

replies

2.0k

views

edger cpm

7.2 years ago jtremblay514 • 0

2

votes

7

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6.5k

views

cpm gene expression matrix tmm normailzation

7.9 years ago kkadzi25 • 0

1

vote

2

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2.3k

views

edger filtering cpm

updated 8.3 years ago by Gordon Smyth 52k • written 8.3 years ago by lynski008 • 0

2

votes

7

replies

2.7k

views

edgeR DE analysis fold change cpm

updated 8.4 years ago by Ryan C. Thompson ★ 7.9k • written 8.4 years ago by Sara ▴ 20

1

vote

6

replies

1.9k

views

limma cpm

updated 8.5 years ago by José Luis Lavín ▴ 10 • written 8.8 years ago by map2085 ▴ 40

1

vote

3

replies

2.7k

views

deseq2 rnaseq rna-seq normalization cpm

updated 8.6 years ago by Wolfgang Huber ★ 13k • written 8.6 years ago by stwestreich • 0

5

votes

4

replies

8.0k

views

edger cpm multiple factor design independent filtering

8.9 years ago dietahanson ▴ 30

13

votes

3

replies

3.8k

views

edger cpm

9.0 years ago mikaelhc ▴ 20

5

votes

3

replies

1.9k

views

edgeR cpm voom limma

9.2 years ago Ryan C. Thompson ★ 7.9k

0

votes

3

replies

3.7k

views

CPM edgeR

9.6 years ago ycding ▴ 10