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Job:
Bioconductor Core developers group opening
R
cloud
github
python
git
20 months ago
Vincent J. Carey, Jr.
6.7k
4
votes
2
replies
732
views
good-first-issue (or similar) GitHub
Culture
R
GitHub
updated 21 months ago by
Michael Love
41k • written 21 months ago by
BioInfoBeginnerrr
• 0
1
vote
2
replies
823
views
How to install R package from GitHub
Install
github
updated 2.2 years ago by
shepherl
3.9k • written 2.2 years ago by
Padam
• 0
0
votes
1
reply
1.9k
views
Installation of r2excel package
github
packages
updated 5.3 years ago by
Gordon Smyth
50k • written 5.3 years ago by
thkapell
▴ 10
0
votes
1
reply
1.2k
views
flowCL - svn conversion to Github
flowCL
git-svn bridge
github
updated 6.3 years ago by
nitesh.turaga
▴ 140 • written 6.3 years ago by
Justin Meskas
▴ 60
0
votes
1
reply
1.5k
views
GIT: Fetch package source from remote upstream
git
github
developers
updated 6.3 years ago by
nitesh.turaga
▴ 140 • written 6.3 years ago by
wirth
• 0
2
votes
2
replies
3.0k
views
Remote rejected after resetting to previous commit
git
github
updated 6.5 years ago by
nitesh.turaga
▴ 140 • written 6.5 years ago by
alex.gos90
▴ 10
1
vote
3
replies
2.0k
views
Access to github repository- how does one know if their ssh public key was accepted
github
package updates
developers
package development
6.6 years ago
rtraborn
• 0
1
vote
2
replies
1.6k
views
Bioconductor / COHCAP GitHub Update
github
git-svn bridge
git
6.7 years ago
cwarden45
• 0
6
votes
0
replies
2.3k
views
News:
Bioconductor git server is now LIVE!
git
github
svn
git-svn bridge
git mirror
News
6.7 years ago
nitesh.turaga
▴ 140
3
votes
2
replies
2.8k
views
How do I clean .git folder?
Git
github
updated 6.9 years ago by
Martin Morgan
25k • written 6.9 years ago by
Mohamad S. Hasan
• 0
0
votes
1
reply
1.2k
views
Question about sumbition process and biocviews
biocviews
biocparallel
github
package submission
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
ioannis.vardaxis
▴ 30
0
votes
8
replies
1.9k
views
Bioconductor SVN server error
software error
github
7.7 years ago
emathe
• 0
0
votes
1
reply
1.0k
views
What happends with a package in submission through the old issue tracker?
github
package submission
rDGIdb
issue tracker
updated 7.9 years ago by
Martin Morgan
25k • written 7.9 years ago by
Thomas Thurnherr
• 0
1
vote
3
replies
1.8k
views
manage github dependency , not CRAN nor bioc
dependency
github
8.3 years ago
kmezhoud
▴ 10
1
vote
2
replies
1.6k
views
GitHub Continuous Integration, unit-tests, vignettes: R Packaging
github
vignette
test
developers
updated 8.4 years ago by
Dan Tenenbaum
★ 8.2k • written 8.4 years ago by
anthonycolombo60
• 0
6
votes
6
replies
3.3k
views
News:
Bioconductor Git/GitHub Mirrors
git
github
git-svn bridge
subversion
News
updated 8.9 years ago by
Guangchuang Yu
★ 1.2k • written 8.9 years ago by
Dan Tenenbaum
★ 8.2k
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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Comment: SGSeq: moving toward diffex from SGSeq analysis
by
Sara
• 0
Thank you for your response. I have another question about saving the sgvc result as a CSV file. I would appreciate your help, please. ``` …
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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