Showing : ReportingTools • reset
1
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1.4k
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Having issues mapping gene Ids during ReportingTools::publish() from Bioconductor.
ReportingTools RNA-Seq RMarkdown
updated 4.2 years ago by 67k • written 4.2 years ago by ▴ 20
1
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4
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1.0k
views
ReportingTools publish(): no image when .modifyDF argument is included
ReportingTools
updated 5.7 years ago by 67k • written 5.7 years ago by • 0
0
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1
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1.8k
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ReportingTools: Error using packet 1 arguments must have same length
reportingtools
6.0 years ago mmokrejs • 0
0
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0
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759
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Changing vertical scale to linear for expression reporting of DESeqDataSet
reportingtools deseq2
6.2 years ago trebbiano • 0
3
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7
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2.2k
views
ReportingTools Segmentation fault
reportingtools reporting tools
updated 6.6 years ago by ▴ 10 • written 6.6 years ago by ▴ 20
2
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2
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1.3k
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How to add more columns to ReportingTools output?
reportingtools microarray annotation differential expression differential analysis
updated 6.9 years ago by 67k • written 6.9 years ago by • 0
0
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0
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1.8k
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Select what conditionsto graph in Report tools with Deseq containing multiple conditions
deseq2 ggplot2 reportingtools
8.0 years ago abass.conteh • 0
0
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3
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1.2k
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Error when installing ReportingTools
reportingtools
8.3 years ago Asma rabe ▴ 290
0
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4
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1.6k
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Error in GOFrame due to NA for unsupported organism (Gene Ontology)
reportingtools annotationhub gostats
updated 8.4 years ago by 67k • written 8.4 years ago by ▴ 20
2
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4
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1.3k
views
ResrtingTools include pvalue NA
reportingtools deseq2 NA pvalue
updated 8.4 years ago by 42k • written 8.4 years ago by ▴ 10
0
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2
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2.1k
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Generating database with non model species to be use by ReportingTools
reportingtools annotationdbi annotationhub ensembldb
updated 8.4 years ago by ★ 2.1k • written 8.4 years ago by ▴ 20
0
votes
8
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1.9k
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ReportingTools include pvalue NA and comparissons
R reportingtools deseq2 pvalue coef
updated 8.4 years ago by 42k • written 8.4 years ago by ▴ 10
0
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1
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1.6k
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DESeq2 followed by Reporting tools lists blank ensemble gene ID's and symbols but has image, logFC and p-value intact in HTML file
deseq2 rnaseq reportingtools
updated 8.6 years ago by 42k • written 8.6 years ago by • 0
1
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4
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1.3k
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Methods in ReportingTools
reportingtools
updated 9.2 years ago by ▴ 70 • written 9.2 years ago by • 0
0
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0
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1.3k
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Change column width in ReportingTools
reportingtools
9.2 years ago benedikt.athmer • 0
1
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1
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1.2k
views
How to add search functions and additional fields to the html file of DESeq2 results created with ReportingTools
ReportingTools deseq2 hwriter
updated 9.4 years ago by 67k • written 9.4 years ago by ▴ 30
0
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2
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1.6k
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hwriter or reportingtools: open link in new tab?
hyperlink ReportingTools hwriter
9.6 years ago Wade Davis ▴ 60
2
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3
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1.6k
views
HTMLReport with Ensembl IDs, with multifactorial design
DESeq2 ReportingTools
updated 9.7 years ago by 67k • written 9.7 years ago by ▴ 180
4
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6
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2.9k
views
HTMLReport of DESeq2 results with Ensembl Gene Ids
reportingtools publish deseq2
updated 9.7 years ago by ▴ 180 • written 9.9 years ago by • 0
6
votes
1
reply
3.2k
views
[ReportingTools] HTMLReport of DESeq2 results using Ensembl Gene Ids
Sequencing Annotation convert biomaRt ReportingTools DESeq2 Sequencing Annotation convert
updated 9.9 years ago by ▴ 370 • written 11.0 years ago by ▴ 160
1
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6
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2.0k
views
Problem on annotation of Deseq2 on reportingtools
Deseq2 reportingtools
updated 10.0 years ago by ▴ 70 • written 10.0 years ago by ▴ 40
0
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2
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1.2k
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ReportingTools does not work with PFAMHyperGResult object
reportingtools
updated 10.2 years ago by 1.6k • written 10.2 years ago by • 0
0
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5
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2.8k
views
Issues about how to filter and annotate the MoGene-2_0-st and MoEx-1_0-st-v1 array probe sets
Annotation probe annotate annaffy oligo ReportingTools Annotation probe annotate annaffy
updated 10.4 years ago by ▴ 160 • written 10.4 years ago by 67k
0
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5
replies
1.9k
views
ReportingTools error message
DESeq ReportingTools DESeq2 DESeq ReportingTools DESeq2
10.5 years ago Assa Yeroslaviz ★ 1.5k
0
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0
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1.3k
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KEGG pathway analysis with ReportingTools
Pathways GO ReportingTools Pathways GO ReportingTools
10.6 years ago Mayte Suarez-Farinas ▴ 510
0
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3
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1.9k
views
ReportingTools and gene annotation
Annotation GO cycle ReportingTools DESeq2 Annotation GO cycle ReportingTools DESeq2
updated 10.8 years ago by 67k • written 10.8 years ago by ▴ 340
0
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7
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3.0k
views
[ReportingTools] and DESeq2 results, publish DESeqDataSet using resultsNames other than the default
Sequencing ReportingTools DESeq2 Sequencing ReportingTools DESeq2
updated 10.8 years ago by 67k • written 10.8 years ago by ▴ 30
0
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2
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1.7k
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Question about ReportingTools used with DESeq2
GO BSgenome BSgenome ReportingTools DESeq2 GO BSgenome BSgenome ReportingTools DESeq2
updated 11.0 years ago by 67k • written 11.0 years ago by ▴ 80
0
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1
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1.2k
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ReportingTools package
ReportingTools ReportingTools
updated 11.0 years ago by ▴ 10 • written 11.1 years ago by ▴ 160
0
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0
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944
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ReportingTools: formatting html report
Alignment ReportingTools Alignment ReportingTools
11.4 years ago Gabriel Becker ▴ 70
0
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0
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2.2k
views
emacs org mode html export using jQuery DataTables (WAS: new package for generating interactive HTML reports)
Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR
11.9 years ago Malcolm Cook ★ 1.6k
0
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12
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2.5k
views
new package for generating interactive HTML reports
Network limma GOstats GSEAlm edgeR ReportingTools Network limma GOstats GSEAlm edgeR
updated 11.9 years ago by ★ 1.6k • written 11.9 years ago by ▴ 20
32 results • Page 1 of 1
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Answer: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://diendannhansu.com/threads/hayal-sohbet-odalari.667004/ https://forum.realdigital.org/u/serkan https://animefagos.com/miembros/ser…
Comment: Unlocking Potential: NURS FPX Strategies and Insights by efsane_kral2000 • 0
https://www.hayalsohbet.net https://www.yerlichat.com https://www.yerlichat.net https://www.mavisim.net https://www.hayalchat.com http…
Comment: Is it recommended to analyze different tissues together when using edgeR by Gordon Smyth 51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data by Melisa Tecik • 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data by James W. MacDonald 67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
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Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
Answer: Allele frequencies for ALL alleles of one SNP ?
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Is it recommended to analyze different tissues together when using edgeR
Answer: Using Affymetrix Custom Array
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