Showing : STRINGdb • reset
0
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15
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2.5k
views
Is the STRINGdb server down?
STRINGdb R protein
updated 4.9 years ago by • 0 • written 5.1 years ago by • 0
2
votes
9
replies
2.1k
views
STRINGdb images very low quality?
STRINGdb
updated 2.3 years ago by ▴ 80 • written 2.4 years ago by ▴ 30
0
votes
7
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1.1k
views
Cannot open URL for StringDB protein.links.v11.5/9606.protein.links.v11.5.txt.gz
STRINGdb
updated 9 months ago by ▴ 80 • written 9 months ago by • 0
0
votes
6
replies
754
views
StringDB: Cannot finish their tutorial because of an error
STRINGdb
updated 8 weeks ago by • 0 • written 11 weeks ago by • 0
0
votes
6
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2.1k
views
STRINGdb : error with string_db$plot_network()
STRINGdb
2.3 years ago • updated 2.2 years ago Wolfgang RAFFELSBERGER ▴ 140
2
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5
replies
1.0k
views
STRINGdb R package reference class instantiation with v12.0
STRINGdb
updated 5 weeks ago by ▴ 80 • written 5 months ago by • 0
2
votes
4
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1.8k
views
STRINGdb string_db$map error
STRINGdb HELP
updated 15 months ago by ▴ 10 • written 2.2 years ago by ▴ 10
3
votes
4
replies
2.2k
views
STRINGdb: Error in download.file(urlStr, temp)
STRINGdb R
updated 2.3 years ago by ▴ 80 • written 2.5 years ago by ▴ 10
2
votes
4
replies
1.5k
views
Can't create STRINGdb v11 object using STRINGdb packages methods
stringdb
5.0 years ago Moosa • 0
0
votes
4
replies
1.4k
views
problem with get_link function
STRINGdb get_link bug
6.3 years ago cristinapasi • 0
2
votes
3
replies
892
views
Potential bug in STRINGdb$get_aliases()
STRINGdb
2.0 years ago AstrobioMike • 0
0
votes
3
replies
2.4k
views
unable to connect to 'string.uzh.ch' on port 80
STRINGdb vignette
updated 7.0 years ago by ▴ 10 • written 7.0 years ago by • 0
0
votes
3
replies
1.3k
views
STRINGdb : accessing all types of (sub-)scores from interactions
STRINGdb
updated 2.7 years ago by ▴ 80 • written 2.7 years ago by ▴ 140
1
vote
2
replies
1.8k
views
How to export a STRINGDB network to XML
STRINGdb
updated 9.0 years ago by ▴ 10 • written 9.0 years ago by ▴ 160
1
vote
2
replies
1.4k
views
string-db.org link not working in generated graphic
STRINGdb
7.5 years ago • updated 7.3 years ago florian.reisinger • 0
0
votes
2
replies
1.2k
views
STRING_id mismatch with STRINGdb
STRINGdb igraph
5.1 years ago Samuel Lee • 0
1
vote
2
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1.0k
views
Filter proteins with known interactions from STRINGdb R package
STRINGdb
2.2 years ago • updated 2.1 years ago Abhishek • 0
0
votes
2
replies
355
views
StringDB: Cannot use payload mechanism to colour nodes
RNASeqData STRINGdb DifferentialExpression GraphAndNetwork Network
4 months ago Luca • 0
2
votes
2
replies
1.1k
views
STRINGdb offline use (via input_directory argument)
STRINGdb
14 months ago Charlotte Soneson ▴ 170
0
votes
1
reply
746
views
Error in mapping the gene names to the STRINGdb identifiers
PPI STRINGdb
updated 2.7 years ago by ▴ 80 • written 2.7 years ago by ▴ 10
0
votes
1
reply
846
views
error with STRINGdb package to download the graph
stringdb R
5.9 years ago Salvo88 ▴ 20
0
votes
1
reply
973
views
How to download All Protein Protein Interactions of an organism with Bioconductor
ppi stringdb mus musculus
updated 6.1 years ago by ▴ 80 • written 6.1 years ago by ▴ 20
0
votes
1
reply
1.4k
views
Plotting protein-protein interaction enrichment with STRINGdb
stringdb error
7.6 years ago Lluís Revilla Sancho ▴ 730
0
votes
1
reply
302
views
Specifying evidence channels in STRINGdb
STRINGdb stringdb
7 months ago robynne.braun • 0
1
vote
1
reply
919
views
How to find the source code of the package STRINGdb ?
STRINGdb Bioconductor
updated 3.2 years ago by 3.9k • written 3.2 years ago by ▴ 10
0
votes
1
reply
792
views
How can I download all supported species information table of STRINGdb V11
STRINGdb STRING
updated 3.5 years ago by 6.7k • written 3.5 years ago by • 0
0
votes
1
reply
992
views
STRINGdb: enrichment function raises error
STRINGdb stringdb gene set enrichment analysis software error go
5.5 years ago wsciekly.maciek ▴ 10
0
votes
1
reply
1.6k
views
Network analysis: Is low confidence score valid (STRING DB)
STRINGdb Network
updated 2.9 years ago by ★ 3.9k • written 2.9 years ago by • 0
0
votes
0
replies
845
views
R: STRINGdb, from get_enrichment() function how to get background gene list that are related to pathways?
R STRINGdb
2.9 years ago choijamts • 0
0
votes
0
replies
437
views
Issues setting background in STRINGdb
STRINGdb MSstats
11 months ago samsiljee • 0
0
votes
0
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1.0k
views
Problem with link generated with R using the string_db$get_link
stringdb
7.0 years ago Ilario De Toma ▴ 10
31 results • Page 1 of 1
Recent ...
Replies
Comment: deseq2 results by swbarnes2 ★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code? by NATASHA • 0
did you find a solution? I´m having the same problem
Comment: error by NATASHA • 0
Please ignore, i didnt copy all the scrip
Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k
If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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