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R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
2.4 years ago
sla
• 0
1
vote
3
replies
1.5k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 3.8 years ago by
Michael Love
41k • written 3.8 years ago by
sarah3
• 0
0
votes
1
reply
587
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
0
votes
5
replies
1.7k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
4.1 years ago
lsilva.m
• 0
2
votes
4
replies
3.6k
views
Error in windows() function
software error
R
windows
updated 5.5 years ago by
Mike Smith
★ 6.5k • written 5.5 years ago by
a
• 0
0
votes
5
replies
1.6k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.2 years ago by
Nicolas Servant
▴ 260 • written 6.2 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.0k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.5 years ago by
Mike Smith
★ 6.5k • written 6.6 years ago by
maxime.fortin
• 0
0
votes
14
replies
2.2k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 7.0 years ago by
Gord Brown
▴ 650 • written 7.0 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.1k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
simon
▴ 10
0
votes
2
replies
1.3k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
8.5 years ago
cyang227
• 0
0
votes
3
replies
2.5k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
8.6 years ago
Miguel Juliá
• 0
8
votes
7
replies
1.8k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Panagiotis Moulos
▴ 30
13 results • Page
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Comment: Too many significant genes when integrating gtex and tcga
by
Michael Love
41k
Yes, this was one of the aspects we highlighted in the 2014 paper, and it's also in the workflow. Check these places first. Also take a st…
Answer: Too many significant genes when integrating gtex and tcga
by
James W. MacDonald
65k
See `?results`, in particular the lfcThreshold argument.
Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Votes
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
stuck on unimplemented type 'list' in 'EncodeElement'
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