Showing : affylmgui • reset
0
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4
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1.5k
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tkrplot in R2.0 on Mac OS X
affylmGUI affylmGUI
updated 19.4 years ago by ▴ 1000 • written 19.4 years ago by ▴ 100
0
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6
replies
2.2k
views
Is anyone developing an extensible Galaxy-like interface for Bioconductor?
affylmGUI limmaGUI affylmGUI limmaGUI
updated 15.7 years ago by ▴ 10 • written 15.8 years ago by ▴ 50
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4
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1.3k
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Exon Array analysis
cdf affylmGUI cdf affylmGUI
updated 15.1 years ago by ▴ 500 • written 15.1 years ago by ▴ 10
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5
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1.5k
views
Problem with Installing affylmGUI on MAC OS X
Cancer affylmGUI Cancer affylmGUI
18.8 years ago Richard Friedman ★ 2.0k
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4
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1.4k
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Regarding CDF file
cdf affylmGUI cdf affylmGUI
updated 10.9 years ago by 65k • written 10.9 years ago by ▴ 170
0
votes
8
replies
1.7k
views
affylmGUI/biocReposList() Problem
affylmGUI affylmGUI
updated 11.8 years ago by 65k • written 11.8 years ago by ▴ 30
0
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2
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900
views
affylmGUI error when normalizing
Microarray Normalization affylmGUI Microarray Normalization affylmGUI
updated 19.2 years ago by ▴ 1000 • written 19.2 years ago by ▴ 30
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votes
8
replies
1.9k
views
oneChannelGUI
Rgraphviz affylmGUI oneChannelGUI Rgraphviz affylmGUI oneChannelGUI
updated 13.5 years ago by ▴ 500 • written 13.5 years ago by ▴ 200
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votes
2
replies
875
views
affylmGUI
drosgenome1 affylmGUI drosgenome1 affylmGUI
updated 20.0 years ago by ▴ 1000 • written 20.0 years ago by ▴ 180
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3
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1.3k
views
limma gene symbol not avialable problem
cdf affy affydata limma affylmGUI affyio cdf affy affydata limma affylmGUI affyio
updated 16.9 years ago by 65k • written 16.9 years ago by ▴ 450
0
votes
3
replies
905
views
Error messages in affylmGUI on PC with respect to plotting
limma affyPLM affylmGUI limma affyPLM affylmGUI
18.8 years ago Seth Falcon ★ 7.4k
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votes
2
replies
1.1k
views
affylmGUI annotations
Annotation annotate affylmGUI Annotation annotate affylmGUI
updated 12.7 years ago by ★ 2.0k • written 12.7 years ago by ▴ 30
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votes
2
replies
1.8k
views
Tktable 2.9 makefile problem
GO affylmGUI GO affylmGUI
updated 12.1 years ago by 25k • written 12.1 years ago by ▴ 10
0
votes
3
replies
1.0k
views
Using CDF file on affylmGUI
Proteomics GO affylmGUI Proteomics GO affylmGUI
updated 17.5 years ago by ▴ 450 • written 17.5 years ago by ▴ 70
0
votes
3
replies
1.1k
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 16.5 years ago by 25k • written 16.5 years ago by ★ 2.0k
0
votes
2
replies
1.4k
views
Is anyone developing an extensible Galaxy-like interface for Bioconductor?
affylmGUI limmaGUI affylmGUI limmaGUI
updated 15.7 years ago by ▴ 90 • written 15.7 years ago by ▴ 140
0
votes
7
replies
1.7k
views
Missing GeneSymbol and Name information in TopTable
Annotation hgu133plus2 annaffy affylmGUI Annotation hgu133plus2 annaffy affylmGUI
updated 14.7 years ago by ★ 7.2k • written 14.7 years ago by ▴ 40
0
votes
1
reply
870
views
Unique CDF File
cdf affylmGUI cdf affylmGUI
updated 14.0 years ago by ★ 6.5k • written 14.0 years ago by ▴ 10
0
votes
1
reply
997
views
Difficulty installing oneChannelGUI in Vista
Cancer affylmGUI oneChannelGUI Cancer affylmGUI oneChannelGUI
updated 13.9 years ago by 65k • written 13.9 years ago by ★ 2.0k
0
votes
1
reply
632
views
Please help: AffylmGUI errors
Microarray affylmGUI ASSIGN Microarray affylmGUI ASSIGN
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 30
0
votes
3
replies
1.2k
views
Error in parse() loading affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 340
0
votes
4
replies
2.4k
views
tcltk package for R 2.14.1
affylmGUI BiocInstaller affylmGUI BiocInstaller
updated 12.3 years ago by ★ 8.2k • written 12.3 years ago by ▴ 70
0
votes
1
reply
1.2k
views
(microarray) - affylmGUI error when reading Affymetrix U133A and U133B .CEL file
Microarray PROcess affylmGUI Microarray PROcess affylmGUI
updated 11.6 years ago by 65k • written 11.6 years ago by ▴ 30
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votes
1
reply
1.2k
views
Regarding CDF & annotation package
Microarray Annotation affylmGUI Microarray Annotation affylmGUI
updated 11.5 years ago by ★ 3.9k • written 11.5 years ago by ▴ 10
0
votes
1
reply
977
views
AffylmGUI freezes with recent updates of Windows 7 Enterprise Service Pack 1
Cancer affylmGUI Cancer affylmGUI
updated 11.3 years ago by ▴ 450 • written 11.3 years ago by ★ 2.0k
0
votes
3
replies
1.4k
views
affylmGUI affy affymetrix
affylmgui
updated 8.4 years ago by 50k • written 8.4 years ago by • 0
0
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2
replies
2.2k
views
How to convert probe sets to Gene symbols ?
affylmgui affymetrix microarrays hgu133plus2
updated 8.4 years ago by ▴ 360 • written 8.4 years ago by • 0
1
vote
6
replies
1.2k
views
Error while running affylmGUI
microarray limma affy affylmGUI
updated 5.2 years ago by 50k • written 5.2 years ago by • 0
0
votes
5
replies
1.2k
views
CDF/Probe/Annotation for GNF1m custom chip
cdf probe affylmGUI cdf probe affylmGUI
updated 17.1 years ago by ★ 6.5k • written 17.1 years ago by ▴ 830
0
votes
1
reply
1.0k
views
loading CEL files in affylmGUI
Annotation affylmGUI Annotation affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 60
0
votes
1
reply
1.1k
views
An error of affylmGUI
cdf affy affylmGUI affyio cdf affy affylmGUI affyio
updated 16.7 years ago by ▴ 450 • written 16.7 years ago by ▴ 450
0
votes
1
reply
1.1k
views
Re: Limma GUI exporting
Microarray limma affylmGUI limmaGUI Microarray limma affylmGUI limmaGUI
19.9 years ago James Wettenhall ▴ 1000
0
votes
3
replies
1.2k
views
Defining and handling replicates
GO affy limma affylmGUI GO affy limma affylmGUI
updated 18.9 years ago by 50k • written 18.9 years ago by ▴ 70
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1
reply
723
views
Is rma in affylmGUI different to affy rma?
affy affylmGUI affy affylmGUI
20.0 years ago Simon Kidd ▴ 180
0
votes
1
reply
885
views
default fdr rate in limma/affylmgui
affylmGUI affylmGUI
updated 16.1 years ago by 65k • written 16.1 years ago by ▴ 420
0
votes
1
reply
951
views
how to import mas5 data into expresso (affy package)
Microarray limma PROcess affylmGUI Microarray limma PROcess affylmGUI
updated 15.9 years ago by 65k • written 15.9 years ago by ▴ 80
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votes
3
replies
3.4k
views
Cutoff to use for IQR filtering in genefilter
affylmGUI affylmGUI
updated 15.9 years ago by ▴ 400 • written 15.9 years ago by ▴ 80
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votes
1
reply
913
views
Anopheles/malaria Affy chips
affy simpleaffy affylmGUI affy simpleaffy affylmGUI
updated 19.9 years ago by ▴ 950 • written 19.9 years ago by ▴ 510
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18
replies
2.3k
views
LPE error caused by gcRMA [Error in var.M.adap[i] <- ifelse(!is.na(var.M.adap[i - 1]), mean(var.M.adap[i + : replacement has length zero]
Cancer gcrma LPE affylmGUI Cancer gcrma LPE affylmGUI
updated 15.5 years ago by ▴ 70 • written 15.5 years ago by ★ 13k
0
votes
8
replies
1.5k
views
affylmGUI segfault on "pd.ragene.1.0.st.v1"
Normalization GO cdf affy affylmGUI Normalization GO cdf affy affylmGUI
updated 15.3 years ago by ★ 13k • written 15.3 years ago by ▴ 70
0
votes
1
reply
766
views
Please add hugene10stv1.cdf
cdf limma affylmGUI cdf limma affylmGUI
updated 15.1 years ago by 65k • written 15.1 years ago by ▴ 10
0
votes
1
reply
751
views
affylmGUI
affylmGUI affylmGUI
updated 19.9 years ago by ▴ 1000 • written 19.9 years ago by ▴ 120
0
votes
2
replies
1.0k
views
R scripts from AffylmGUI
Microarray affylmGUI Microarray affylmGUI
updated 14.8 years ago by ▴ 450 • written 14.8 years ago by ▴ 200
0
votes
1
reply
925
views
Affy huGENE ST arrays
cdf affy affylmGUI cdf affy affylmGUI
updated 14.7 years ago by ★ 7.2k • written 14.7 years ago by ▴ 10
0
votes
2
replies
1.2k
views
Bioconductor does not provide Humane gene ST annotation "hugene10stv1cdf" to work with affylmGUI?!
Annotation cdf affylmGUI Annotation cdf affylmGUI
updated 14.6 years ago by ★ 7.2k • written 14.6 years ago by ▴ 10
0
votes
1
reply
800
views
FW: Question (vennDiagram vs. topTable) for AffylmGUI 1.3.0
GO limma affylmGUI GO limma affylmGUI
updated 18.6 years ago by 50k • written 18.6 years ago by ▴ 50
0
votes
1
reply
835
views
Access to Affy chip annotation data in affylmGUI
mouse4302 affylmGUI mouse4302 affylmGUI
updated 18.3 years ago by ★ 7.4k • written 18.3 years ago by ▴ 10
0
votes
2
replies
878
views
affylmGUI problem with tkcmd
affylmGUI affylmGUI
updated 17.4 years ago by ▴ 80 • written 17.4 years ago by ★ 7.4k
0
votes
0
replies
1.1k
views
TopTable function in affylmGUI does not have Gene names
affylmGUI affylmGUI
12.4 years ago Guest User ★ 13k
0
votes
0
replies
1.0k
views
Issues running affylmGUI
Cancer Breast affylmGUI Cancer Breast affylmGUI
13.4 years ago Lorenzo Melchor ▴ 50
50 results • Page 1 of 1
Recent ...
Replies
Comment: The difference when using Limma compare between 3 conditions vs 2 conditions by Chris • 0
When using `arrayWeights()`, you mean the variability within the same group, is that correct? I alway run `arrayWeights()` because I naive …
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Sey R. • 0
Thank you for your response
Comment: Different number of exons in reference genome affects DEXSeq analysis by Alejandro Reyes ★ 1.9k
Hi Alessia. Makes sense. Something I use often are the support levels from ENSEMBL and the annotation of principal isoforms. These substant…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Michael Love 41k
Sorry, for questions about statistical analysis plan and interpretation of results, I recommend to work with a local statistician or someon…
Answer: Fold change calculation in Diffbind vs. DESEQ2? by Michael Love 41k
There was a recent DiffBind question on the support site that noticed the same thing, try searching recent DiffBind posts.
Votes
Comment: Why p value inconsistent when using different number of pathway score?
Nominations for Bioconductor Awards 2024!
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
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