Bioconductor Bed

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readTranscriptFeatures R genomation bed

updated 15 months ago by James W. MacDonald 65k • written 16 months ago by sat • 0

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bed bigBed rtracklayer ucsc

18 months ago L ▴ 50

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rtracklayer R bed

updated 16 months ago by Walters • 0 • written 21 months ago by L ▴ 50

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mappability bed python

updated 2.3 years ago by James W. MacDonald 65k • written 2.3 years ago by the • 0

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rtracklayer bed genomicranges

updated 5.5 years ago by Michael Lawrence ★ 11k • written 5.5 years ago by foehn ▴ 100

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5.6 years ago maltethodberg ▴ 180

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bed vcf

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granges bed genomicranges genomeintervals deseq2

6.3 years ago rbronste ▴ 60

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rtracklayer bed software error

updated 6.7 years ago by Michael Lawrence ★ 11k • written 6.7 years ago by Ryan C. Thompson ★ 7.9k

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coverage bed

updated 6.7 years ago by James W. MacDonald 65k • written 6.7 years ago by sgupt46 • 0

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annotationhub bugs encode bed

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rtracklayer bed

updated 3.2 years ago by merv ▴ 120 • written 8.1 years ago by Ryan C. Thompson ★ 7.9k

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updated 8.1 years ago by Michael Lawrence ★ 11k • written 8.1 years ago by Peter Hickey ▴ 740

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gviz BED Ucsc UcscTrack

8.3 years ago Andy91 ▴ 60

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rtracklayer NA BED getseq

8.5 years ago Dimitris Polychronopoulos ▴ 80

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readvcf plink file conversion bed bioc-devel

9.1 years ago mjsduncan • 0

16 results • Page 1 of 1

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Comment: EGSEA usage with microarray data (with vooma)? by Chris • 0

Hi Pekka, I also try EGSEA with microarray data. However, I got this error. Would you please have a suggestion? gsa = egsea.ma(numeric…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

> Any suggestions for methylation data segmentation? I think the same segmentation can be used.

Comment: deseq2 results by swbarnes2 ★ 1.3k

Cross-posted https://www.biostars.org/p/9594331/#9594458

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it by Mike Smith ★ 6.5k

The other answers here are all good and demonstrate the issue with floating point comparisons nicely. I'd like to add that your particular…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Nudging my question. I could do with confirmation before proceeding with my current projects. Thank you.

Votes

A: Volcanoplot with limma - RAW P-values or Adj.P-Values

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

Answer: minfi latest update for EPIC V2 chip

A: Error in DESeqDataSet : some values in assay are not integers

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Teacher to Michael Love 42k