Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
masigpro
•
reset
0
votes
5
replies
5.8k
views
masigpro Error in terms.formula(formula, data = data) : '.' in formula and no 'data' argument
masigpro
updated 9 months ago by
Tatsuya
• 0 • written 9.0 years ago by
john
▴ 120
3
votes
7
replies
5.8k
views
Limma PlotMDS: what values should be used?
limma
edger
plotmds
tmm
masigpro
6.4 years ago
dacaba.92
▴ 10
0
votes
3
replies
1.3k
views
maSigPro and EMV no longer available for windows.
maSigPro
maSigPro
updated 15.0 years ago by
Ana Conesa
▴ 340 • written 15.0 years ago by
Giulio Di Giovanni
▴ 540
0
votes
2
replies
1.4k
views
question about p-values in maSigPro
affy
maSigPro
affy
maSigPro
14.9 years ago
Dick Beyer
★ 1.4k
0
votes
2
replies
1.1k
views
Time course cDNA two color array analysis
TimeCourse
limma
timecourse
maSigPro
TimeCourse
limma
timecourse
maSigPro
17.3 years ago
Marcelo Laia
▴ 450
0
votes
3
replies
2.1k
views
maSigPro genes from clusters
masigpro
clustering
updated 3 days ago by
anne-laure
• 0 • written 7.9 years ago by
ls299
• 0
1
vote
3
replies
1.3k
views
masigpro: could not find function "negative.binomial"
masigpro
5.5 years ago
nicolas.descostes
▴ 20
0
votes
6
replies
1.7k
views
[maSigPro] two color array analysis of time series in different cell lines.???
limma
maSigPro
limma
maSigPro
updated 5.7 years ago by
sbbinfo90
• 0 • written 10.6 years ago by
neeraj rana
▴ 60
0
votes
1
reply
1.2k
views
Paired Data in maSigPro
maSigPro
maSigPro
13.4 years ago
Mike Walter
▴ 230
0
votes
1
reply
1.6k
views
Design matrix for time course analysis with maSigPro
GLAD
maSigPro
GLAD
maSigPro
updated 14.0 years ago by
Wolfgang Huber
★ 13k • written 14.0 years ago by
Matthias Boeck
▴ 10
0
votes
1
reply
1.2k
views
MaSigPro
maSigPro
maSigPro
updated 16.6 years ago by
Mª José Nueda
▴ 90 • written 16.6 years ago by
Narinder Singh Sahni
▴ 50
0
votes
1
reply
1.3k
views
maSigPro error in getting a design matrix
maSigPro
a4
maSigPro
a4
14.6 years ago
lohith madireddy
▴ 40
0
votes
1
reply
1.3k
views
Fwd: maSigPro - NA values for coefficient estimates - Is a polynomical fit recommended for my data?
Annotation
limma
maSigPro
a4
Annotation
limma
maSigPro
a4
updated 14.5 years ago by
jeremy wilson
▴ 150 • written 14.5 years ago by
Ana Conesa
▴ 340
0
votes
3
replies
1.4k
views
[maSigPro] How to analyze 2-colour microarrays?
Normalization
limma
maSigPro
Normalization
limma
maSigPro
updated 14.1 years ago by
Mª José Nueda
▴ 90 • written 14.1 years ago by
boczniak767
▴ 720
0
votes
1
reply
1.8k
views
[maSigPro] Error in T.fit - NAs introduced by coercion
maSigPro
maSigPro
updated 14.1 years ago by
Mª José Nueda
▴ 90 • written 14.1 years ago by
boczniak767
▴ 720
0
votes
1
reply
1.2k
views
clustering of microarray time-series data
Microarray
Clustering
limma
maSigPro
Microarray
Clustering
limma
maSigPro
updated 13.6 years ago by
avehna
▴ 240 • written 13.6 years ago by
boczniak767
▴ 720
0
votes
3
replies
1.3k
views
[maSigPro] T.fit - Error in rownames(coefficients)
maSigPro
maSigPro
updated 13.5 years ago by
Mª José Nueda
▴ 90 • written 13.5 years ago by
boczniak767
▴ 720
0
votes
1
reply
1.9k
views
maSigPro and "subscript out of bounds"
Normalization
Regression
maSigPro
Normalization
Regression
maSigPro
updated 13.0 years ago by
Andrea Grilli
▴ 240 • written 13.0 years ago by
Valerie Obenchain
★ 6.8k
0
votes
3
replies
1.4k
views
maSigPro and "vars" argument
maSigPro
maSigPro
updated 12.7 years ago by
Mª José Nueda
▴ 90 • written 12.7 years ago by
Andrea Grilli
▴ 240
0
votes
1
reply
982
views
maSigPro dataset information
maSigPro
maSigPro
10.6 years ago
Guest User
★ 13k
0
votes
1
reply
3.3k
views
maSigPro help- p. vector error
RNASeq
maSigPro
a4
RNASeq
maSigPro
a4
updated 8.6 years ago by
Mª José Nueda
▴ 90 • written 10.3 years ago by
Guest User
★ 13k
0
votes
1
reply
1.7k
views
Microarray time-course clustering, using "hclust" in masigPro
clustering
hclust
maSigPro
updated 8.2 years ago by
efejiroe
• 0 • written 8.8 years ago by
dimitri.leonid.lindenwald
▴ 50
0
votes
2
replies
1.2k
views
row with zeros
maSigPro
min.obs
p.vector
updated 8.6 years ago by
Mª José Nueda
▴ 90 • written 8.6 years ago by
gmdc
• 0
0
votes
1
reply
1.5k
views
maSigPro: error using see.genes()
masigpro
updated 6.2 years ago by
therealsisterdot
• 0 • written 7.0 years ago by
valentine.murigneux
• 0
1
vote
1
reply
920
views
Are significant genes ordered in maSigPro?
masigpro
rnaseq
updated 7.0 years ago by
James W. MacDonald
66k • written 7.0 years ago by
itspilipineiro
• 0
4
votes
5
replies
2.2k
views
MasigPro and estimation of theta for negative binomial law
R
masigpro
edgr
rnaseq
negative binomial model
6.3 years ago
nicolas.hipp
▴ 20
0
votes
3
replies
861
views
MaSigPro Single Series Analysis
maSigPro
updated 14 months ago by
guang-hui
• 0 • written 4.2 years ago by
dorothy.mitchell
• 0
0
votes
2
replies
1.3k
views
maSigPro see.genes function gives "invalid 'times' argument" error for single time course data
masigpro
4.0 years ago • updated 3.4 years ago
daw277
• 0
0
votes
1
reply
982
views
maSigPro see.genes expression profile graphs. Change color and label text size
maSigPro
graph
updated 3.4 years ago by
Mª José Nueda
▴ 90 • written 3.5 years ago by
Itzel
• 0
0
votes
0
replies
1.2k
views
maSigPro - NA values for coefficient estimates - Is a polynomical fit recommended for my data?
limma
maSigPro
a4
limma
maSigPro
a4
14.5 years ago
jeremy wilson
▴ 150
0
votes
0
replies
812
views
maSigPro groups comparisons
masigpro
7.9 years ago
ls299
• 0
0
votes
0
replies
986
views
Block design for maSigPro
masigpro
timecourse
7.8 years ago
sanj
▴ 20
0
votes
1
reply
415
views
T.fit function of maSigPro returns error message
maSigPro
8 months ago
hanna.g
• 0
0
votes
0
replies
6.3k
views
maSigPro error PlotGroups [Error: (list) object cannot be coerced to type 'double']
masigpro
error
PlotGroups
7.0 years ago
nicolas.descostes
▴ 20
0
votes
0
replies
446
views
maSigPro visualizing individually each plot from each cluster
plot
maSigPro
Clustering
20 months ago
oseias.rf.junior
• 0
0
votes
0
replies
934
views
Iso-maSigPro errors in IsoModel and PodiumChange
masigpro
6.6 years ago
xin.zhou
• 0
0
votes
0
replies
947
views
How to specify covariates in maSigPro analysis (like limma)
masigpro
covariates
limma
differential expression
time-course
6.6 years ago
veersingh.marwah
• 0
0
votes
0
replies
1.1k
views
Understanding NextMaSigPro, regression fit and stepwise regression
timecourse
rnaseq
masigpro
6.4 years ago
jelisaveta.jeki.djordjevic
• 0
0
votes
0
replies
1.5k
views
maSigPro time problem (2.trial)
maSigPro
maSigPro
15.0 years ago
Klaus-Peter Pleissner
▴ 70
1
vote
0
replies
507
views
Normalization RNA-seq data maSigPro
maSigPro
21 months ago
W.a.m.dekker
▴ 10
0
votes
0
replies
1.1k
views
maSigPro and "subscript out of bounds"
Normalization
Regression
maSigPro
Normalization
Regression
maSigPro
13.0 years ago
Andrea Grilli
▴ 240
0
votes
0
replies
1.2k
views
microarray analysis of a dose response * strain experiment
Microarray
affy
limma
maSigPro
DOSE
BRAIN
Microarray
affy
limma
maSigPro
DOSE
BRAIN
17.6 years ago
Naomi Altman
★ 6.0k
0
votes
1
reply
1.3k
views
glm.fit problem with maSigPro
software error
maSigPro
Nueda
RNAseq
updated 5.3 years ago by
James W. MacDonald
66k • written 5.3 years ago by
lalamig
• 0
0
votes
0
replies
1.2k
views
[maSigPro] Splitting data - how?
maSigPro
maSigPro
13.1 years ago
Valerie Obenchain
★ 6.8k
0
votes
1
reply
834
views
t.fit stops in masigpro while running RNA seq data
RNASeqData
maSigPro
3.1 years ago
subashika
• 0
0
votes
0
replies
291
views
maSigPro drug concentration
maSigPro
8 months ago
jiawen
• 0
0
votes
1
reply
1.6k
views
RNASeq time-course analysis with maSigPro: T.fit error when assessing multiple groups
rnaseq
masigpro
timecourse
9.1 years ago
Ryan Goosen
• 0
0
votes
2
replies
851
views
maSigPro Influential genes, step.methods and gene removal
maSigPro
TimeCourse
updated 3.9 years ago by
Michael Love
42k • written 3.9 years ago by
DcL-A
• 0
0
votes
2
replies
818
views
maSigPro: PlotGroups function only plots one out of six time points
maSigPro
PlotGroups
updated 4 months ago by
QINYAN
• 0 • written 3.8 years ago by
Olof.rundquist
• 0
0
votes
1
reply
1.2k
views
Paralelization of maSigPro
maSigPro
parallel
8.6 years ago
gmdc
• 0
50 results • Page
1 of 1
Recent ...
Replies
Answer: Errors in chromosome annotation-biomaRt
by
James W. MacDonald
66k
If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …
Comment: Help with ENmix readidat
by
James W. MacDonald
66k
Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …
Comment: LRT, more than two conditions and pairwise comparisons
by
James W. MacDonald
66k
In that case, probably easiest to subset to the groups being compared.
Comment: Help with ENmix readidat
by
minardsmitha
▴ 10
Did you figure this out? I have the same issue.
Comment: LRT, more than two conditions and pairwise comparisons
by
boczniak767
▴ 720
Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …
Votes
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
Comment: DESeq2- Mysterious interaction suppresses DEGs
Answer: DESeq2- Mysterious interaction suppresses DEGs
Answer: Subsetting RNAseq data | voomaByGroup()
Awards
• All
Popular Question
to
landenshanie
▴ 40
Popular Question
to
minardsmitha
▴ 10
Teacher
to
Vincent J. Carey, Jr.
6.7k
Popular Question
to
Mike
• -60
Popular Question
to
shepherl
3.9k
Locations
• All
Vietnam,
2 minutes ago
WEHI, Melbourne, Australia,
6 minutes ago
Melbourne, Australia,
39 minutes ago
The city by the bay,
1 hour ago
Singapore,
2 hours ago
Traffic: 542 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6