Showing : methyAnalysis • reset
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression methyAnalysis MethylationArray
5.2 years ago coobzie • 0
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Methylation data visualization using methyAnalysis with minfi
methylation microarray illumina minfi methyanalysis
updated 7.1 years ago by ★ 1.3k • written 7.1 years ago by • 0
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methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
7.9 years ago mcahn • 0
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4
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3.6k
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Problem in installing Bioconductor packages due to "IRanges"
lumi methylumi methyAnalysis
8.0 years ago topijush ▴ 10
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Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
8.1 years ago charleneee95 • 0
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4.8k
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strange results from differential methylation analysis using limma
limma methylation methyanalysis IMA
updated 3.7 years ago by 21k • written 8.8 years ago by • 0
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methyAnalysis: heatmapByChromosome not works
methyAnalysis
9.3 years ago Shicheng Guo • 0
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1.3k
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problem with identifySigDMR command
methyAnalysis
9.5 years ago • updated 9.4 years ago yuping.zhang • 0
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2.0k
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methyAnalysis error with example data
methyanalysis
9.6 years ago Tom ▴ 10
4
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5.7k
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Illumina MethylationEPIC vs. 450K
methylumi minfi illuminahumanmethylation450k.db 450k methyanalysis
updated 9.9 years ago by ▴ 760 • written 9.9 years ago by ▴ 60
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3.2k
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MethylAid package visualize function not opening a web browser
illimina 450k methylation methyanalysis methylaid
10.3 years ago jdangelo • 0
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5.2k
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methyAnalysis M values and Beta Values
methyAnalysis methyanalysis 450k
updated 10.9 years ago by ▴ 80 • written 10.9 years ago by ▴ 370
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5
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2.0k
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Understanding methyAnalysis Results
methyAnalysis methyanalysis methylation illuminahumanmethylation450k.db
updated 10.9 years ago by ▴ 80 • written 10.9 years ago by ▴ 370
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
11.9 years ago Allegra Petti ▴ 120
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3.0k
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methyAnalysis for DMR identification
convert methyAnalysis convert methyAnalysis
updated 11.9 years ago by ▴ 160 • written 11.9 years ago by ★ 13k
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6
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3.7k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
updated 11.9 years ago by 68k • written 11.9 years ago by ★ 13k
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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer charm minfi methyAnalysis Cancer charm minfi methyAnalysis
12.9 years ago Ed Schwalbe ▴ 20
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genoset:::initGenoSet
methyAnalysis methyAnalysis
updated 12.9 years ago by ▴ 440 • written 12.9 years ago by ▴ 20
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Loading Data into MethyAnalysis
Microarray methyAnalysis Microarray methyAnalysis
updated 13.0 years ago by ▴ 440 • written 13.0 years ago by ★ 13k
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1.4k
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methyAnalysis methyGenoSet function
methyAnalysis methyAnalysis
updated 13.0 years ago by 21k • written 13.0 years ago by ▴ 10
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
13.0 years ago Pan Du ▴ 440
21 results • Page 1 of 1
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Comment: Incosistencies in buildSNNGraph() function by ATpoint ★ 5.0k
Just played with this a bit and I think it comes down to not having a fixed seed before running the leiden thingy. Same goes for PCA and UM…
Answer: Incosistencies in buildSNNGraph() function by Aaron Lun ★ 29k
The most obvious thing that comes to mind is the RNG seed. `cluster_leiden()` does some random number generation, somewhere deep in the **i…
Comment: Opportunity to host EuroBioC2026 Preconference workshops! by TikTsokaas33ocissalpc • 0
Thank you for sharing the EuroBioC2026 workshop opportunity. I m interested in hosting a hands on session teaching reproducible data analys…
Comment: Ensembl plants at annotationHub? by jwp48 • 0
Nope I don't mind haha! Anyway thanks so much! Thats super kind of you!
Answer: Combining two proteomics datasets with limpa by Gordon Smyth 53k
Hi Andrew, We don't have that much experience combining different datasets with limpa yet, but my feeling is that the same DPC should be u…
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Answer: Incosistencies in buildSNNGraph() function
Answer: Where do the filename come from in the LOLA datasets?
Bioconductor Maintainer Application
A: What is logFC and "B" in methylation analysis ??
limma moderated t-statistics and B-statistics
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Popular Question to Gordon Smyth 53k
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Popular Question to Hervé Pagès 16k
Teacher to Michael Love 43k
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