Biostar Package development

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526

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cran package development dependencies

updated 3.6 years ago by Peter Langfelder ★ 2.6k • written 3.6 years ago by bjgrant • 0

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655

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developers bioc-devel package development circular dependencies

updated 3.6 years ago by shepherl 3.1k • written 3.6 years ago by Tim Triche ★ 4.2k

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556

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package development r package problem build/check error mmappr2

3.6 years ago Kyle Johnsen ▴ 20

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871

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package development

updated 3.7 years ago by Martin Morgan 25k • written 3.7 years ago by ntueeb05howard • 0

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1.0k

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package development size limit external data

updated 4.1 years ago by Aaron Lun ★ 27k • written 4.1 years ago by YaGalbi ▴ 20

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1.1k

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tissue specificity r package package development

updated 4.3 years ago by jaro.slamecka ▴ 130 • written 4.3 years ago by YaGalbi ▴ 20

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2.2k

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package development bioconductor rstudio rmarkdown vignettes

4.5 years ago clarisbaby • 0

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1.8k

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bioconductor package development R roxygen2 warning

4.6 years ago clarisbaby • 0

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705

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bioccheck package development

4.6 years ago Paul Brennan ▴ 10

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1.6k

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bioccheck roxygen2 warning bioc-devel package development

updated 4.6 years ago by Lluís Revilla Sancho ▴ 660 • written 4.6 years ago by Paul Brennan ▴ 10

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1.1k

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github package updates developers package development

4.7 years ago rtraborn • 0

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1.4k

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subversion bioc-devel package development usedevel Tutorial

4.8 years ago Bohdan Khomtchouk ▴ 10

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671

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job position next-generation sequencing package development Job

4.9 years ago Thomas Girke ★ 1.7k

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Comment: Italicise by Pau • 0

They're the same: example of the vignette: "italic('VCAM1')" and result from my data: "italic('CARS1')" As I am running against time be…

Comment: Can Differential Isoform expression analysis can be performed using DESeq2 packa by priyanka.m • 0

Thank you for the suggestions. I will try to compare my results and accordingly interpret the two.

Answer: [sva] Error in density.default(x, adjust = adj) : 'x' contains missing values by wahaha • 0

I found the reason, because some gene expression levels are 0 in all samples. you can add these code to check the data: >exp_mean <- appl…

Answer: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

The comment from @mikelove about specifying numeric contrasts answered my question. This code is not standalone, but I will leave it here i…

Comment: DESeq2 how to specify contrast to test difference of differences by Nicole • 0

Thank you, @mikelove - that did it! The results make sense now. From my original post, could you clarify what the `group1w.sexfemale` contr…

Votes

Answer: DESeq2 how to specify contrast to test difference of differences

Comment: DESeq2 how to specify contrast to test difference of differences

Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a

Answer: biomaRt error unable to fix: need help troubleshooting

Answer: edgeR : results from goana and kegga functions show opposite sig. p-value

Awards • All

Scholar to Nicole • 0

Teacher to Michael Love 37k