Bioconductor Update

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485

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Versions Update BindingSiteFinder

updated 15 months ago by Mike Smith ★ 6.5k • written 15 months ago by M.Klostermann • 0

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1.3k

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update Omixer maintainer

updated 3.4 years ago by shepherl 3.8k • written 3.4 years ago by l.j.sinke • 0

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1.3k

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software error packages update

updated 3.8 years ago by James W. MacDonald 65k • written 3.8 years ago by bs14ab • 0

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3.0k

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biocmanager valid update packages

updated 4.0 years ago by Kevin Blighe ★ 3.9k • written 4.0 years ago by bs14ab • 0

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656

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update new release version

4.6 years ago zzrickli • 0

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2.0k

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biocLite update all default ask

updated 5.2 years ago by Fischer-philipp ▴ 30 • written 5.2 years ago by rgiannico ▴ 10

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1.1k

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PANTHER.db update annotation go

updated 5.2 years ago by Martin Morgan 25k • written 5.2 years ago by alfonsosaera • 0

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789

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support.bioconductor.org update News

5.3 years ago shepherl 3.8k

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873

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bioclite package installation update

7.1 years ago Malcolm Cook ★ 1.6k

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2.0k

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installation update

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by debg • 0

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6.9k

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bioconductor biocupgrade upgrade update bioclite

8.0 years ago enricoferrero ▴ 660

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6.5k

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deseq2 update

9.3 years ago zshao1 • 0

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5.5k

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update bioclite

updated 9.5 years ago by Dan Tenenbaum ★ 8.2k • written 9.5 years ago by dianmante • 0

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1.5k

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experimentdata update

updated 9.6 years ago by Laurent Gatto 1.6k • written 9.6 years ago by paul.theodor.pyl ▴ 10

14 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …

Answer: PCA plot suggestions by Michael Love 41k

For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length by ussarizona ▴ 10

Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…

Answer: Deseq2. decontXcounts not integers. Useful alternative? by Michael Love 41k

Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…

Answer: ATACseq merge peaks by ATpoint ★ 4.0k

That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…

Votes

Answer: Math expression in shapeCustom legend in EnhancedVolcano

Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length