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windows
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R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
2.4 years ago
sla
• 0
1
vote
3
replies
1.4k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 3.7 years ago by
Michael Love
41k • written 3.7 years ago by
sarah3
• 0
0
votes
1
reply
581
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.0 years ago
joanmarquez21
• 0
0
votes
5
replies
1.7k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
4.1 years ago
lsilva.m
• 0
2
votes
4
replies
3.6k
views
Error in windows() function
software error
R
windows
updated 5.5 years ago by
Mike Smith
★ 6.5k • written 5.5 years ago by
a
• 0
0
votes
5
replies
1.6k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.1 years ago by
Nicolas Servant
▴ 260 • written 6.1 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.0k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 6.4 years ago by
Aaron Lun
★ 28k • written 6.4 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.3k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 6.4 years ago by
Mike Smith
★ 6.5k • written 6.6 years ago by
maxime.fortin
• 0
0
votes
14
replies
2.2k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 7.0 years ago by
Gord Brown
▴ 650 • written 7.0 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.0k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 8.0 years ago by
Martin Morgan
25k • written 8.0 years ago by
simon
▴ 10
0
votes
2
replies
1.3k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
8.5 years ago
cyang227
• 0
0
votes
3
replies
2.5k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
8.6 years ago
Miguel Juliá
• 0
8
votes
7
replies
1.8k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 9.6 years ago by
Martin Morgan
25k • written 9.6 years ago by
Panagiotis Moulos
▴ 30
13 results • Page
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Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
shuwangxinze1996
• 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Comment: Trying to use enrichGO
by
fernanda.backsouza
▴ 10
With all my love, thank you Guido, GOxploreR beeing a big ally for me. I don't know how to be grateful right now.
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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