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Bioconductor
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4
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9.5k
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Bioconductor version cannot be validated
Bioconductor
Annotation
Ann
written 2.5 years ago by
Aytaç
• 0
0
votes
2
replies
684
views
GBCC2025: New Scholarship Opportunities Available!
Community
Conference
GBCC2025
Bioconductor
updated 6 months ago by
Liona
• 0 • written 9 months ago by
Maria Doyle
▴ 110
0
votes
1
reply
668
views
Best tximport quant.genes.sf
tximport
tximeta
Bioconductor
updated 9 months ago by
ATpoint
★ 5.0k • written 9 months ago by
yob4003
• 0
0
votes
2
replies
904
views
Version conflict when pushing to scQTLtools devel branch
Bioconductor
written 10 months ago by
XFWu
• 0
1
vote
5
replies
1.9k
views
Package developing and interoperation with Bioconductor
Package
Bioconductor
written 11 months ago by
slizchap
• 0
0
votes
5
replies
2.9k
views
News:
EuroBioC2024 abstract submission is open!
Conference
Bioconductor
EuroBioC2024
written 2.1 years ago by
Maria Doyle
▴ 110
0
votes
1
reply
1.1k
views
News:
List of Deprecated Packages for Bioc3.20
Release
Devel
Bioconductor
16 months ago • updated 11 months ago
shepherl
4.3k
0
votes
0
replies
706
views
News:
EuroBioC2025: Abstract Submissions Open!
EuroBioC2025
Community
Conference
Bioconductor
12 months ago
Maria Doyle
▴ 110
0
votes
3
replies
745
views
batch effect removal for agilent microarray data
"
"Bioconductor"
Bioconductor
12 months ago
gaye.yilmaz
• 0
0
votes
0
replies
736
views
Job:
Research Software Engineer - Bioconductor tools for biological data science and AI
Bioconductor
12 months ago
Wolfgang Huber
★ 13k
0
votes
5
replies
2.9k
views
For some reason I can't update BiocManager to 3.20
Bioconductor
updated 12 months ago by
shepherl
4.3k • written 12 months ago by
azm.ana2
• 0
0
votes
0
replies
648
views
News:
GBCC2025 Abstract Submissions & Registration Now Open!
Community
Conference
GBCC2025
Bioconductor
12 months ago
Maria Doyle
▴ 110
0
votes
0
replies
349
views
News:
Announcing the GBCC2025 Logo Design Winner!
Community
Conference
GBCC2025
Bioconductor
13 months ago
Maria Doyle
▴ 110
1
vote
0
replies
722
views
News:
Bioconductor Course, Kenya 2025: Applications Open!
Events
Community
Training
Africa
Bioconductor
13 months ago
Maria Doyle
▴ 110
0
votes
4
replies
2.4k
views
News:
EuroBioC2023 abstract submission closing soon!
presentation
EuroBioc2023
Conference
community
Bioconductor
written 2.9 years ago by
Maria Doyle
▴ 110
0
votes
2
replies
767
views
Build error on kunpeng2 Linux aarch64
Bioconductor
updated 14 months ago by
wise
• 0 • written 14 months ago by
Hongxiang
• 0
2
votes
1
reply
1.8k
views
bioconductor packages on bioconda
Bioconductor
updated 15 months ago by
James W. MacDonald
68k • written 15 months ago by
risch.vinzent
• 0
1
vote
3
replies
1.8k
views
Allele frequencies for ALL alleles of one SNP ?
Bioconductor
15 months ago
Abiologist
• 0
10
votes
7
replies
2.5k
views
Why in Bioconductor community people rarely upvote questions?
bioconductor
updated 15 months ago by
shepherl
4.3k • written 3.1 years ago by
L
▴ 50
1
vote
0
replies
1.8k
views
News:
Bioconductor 3.20 is Released!
Bioconductor
Release
Software
16 months ago
shepherl
4.3k
0
votes
0
replies
640
views
News:
Announcing the GBCC2025 Logo Design Contest!
Conference
Community
Galaxy
GBCC2025
Bioconductor
16 months ago
Maria Doyle
▴ 110
1
vote
3
replies
1.6k
views
Tutorial regarding metabolomics with R
Bioconductor
Metabolomics
xcms
updated 16 months ago by
James W. MacDonald
68k • written 16 months ago by
abhisek001
• 0
1
vote
2
replies
1.1k
views
DESeq2 design and contrasts with 2 drug-treated and one control group
DESeq2
Bioconductor
updated 17 months ago by
Michael Love
43k • written 17 months ago by
JT
▴ 10
0
votes
0
replies
583
views
News:
Opportunity for Carpentries Instructors to Teach Bioconductor in Africa
Carpentries
Community
Teaching
Bioconductor
17 months ago
Maria Doyle
▴ 110
2
votes
9
replies
1.9k
views
Can't post a question?
Bioconductor
updated 11 months ago by
DavideSant
• 0 • written 17 months ago by
blmurphy
• 0
2
votes
2
replies
875
views
How to read OSCA book?
BIOCON
OSCA
Bioconductor
17 months ago
zr
• 0
1
vote
2
replies
929
views
WARNING: No Bioconductor dependencies detected.
Bioconductor
Biocon
17 months ago
katja.danielzik
• 0
0
votes
3
replies
916
views
concentration tables suitable as input for new packages?
Bioconductor
written 18 months ago by
katja.danielzik
• 0
2
votes
0
replies
1.1k
views
News:
Save the Date for EuroBioC2025 in Barcelona!
EuroBioC2025
Conference
Bioconductor
Community
18 months ago
Maria Doyle
▴ 110
0
votes
5
replies
2.1k
views
ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
Bioconductor
clusterProfiler
updated 17 months ago by
Lluís Revilla Sancho
▴ 760 • written 18 months ago by
semra
• 0
0
votes
4
replies
2.4k
views
News:
Announcing GBCC 2025: The first-ever joint conference between Bioconductor and Galaxy!
Conference
Bioconductor
Community
updated 4 months ago by
dzv20413
• 0 • written 18 months ago by
Maria Doyle
▴ 110
0
votes
1
reply
2.7k
views
Unable to install/use limma
limma
Bioconductor
updated 18 months ago by
James W. MacDonald
68k • written 18 months ago by
Jennifer
• 0
1
vote
2
replies
721
views
Review process for delivering R packages
Bioconductor
18 months ago
XFWu
• 0
0
votes
1
reply
853
views
News:
BioCAsia 2024 Registration Now Open!
BioCAsia2024
Conference
Community
Bioconductor
18 months ago
Maria Doyle
▴ 110
1
vote
3
replies
1.8k
views
Non-zero exit status error when installing GenomeInfoDbData
DECIPHER
GenomeInfoDbData
Bioconductor
GenomeInfoDb
written 18 months ago by
dbjohnson7
• 0
0
votes
0
replies
801
views
Job:
PhD position: Analysis of epistatic interactions in enzymes using long-read sequencing data
NGS
AI
Bioconductor
updated 18 months ago by
Tyler Sagendorf
▴ 10 • written 18 months ago by
Gerhard Thallinger
▴ 180
0
votes
0
replies
620
views
BioCAsia 2024 Abstract Deadline - August 26th
BioCAsia2024
Community
Conference
Bioconductor
18 months ago
Maria Doyle
▴ 110
0
votes
0
replies
825
views
News:
EuroBioC Updates: Important Deadlines
Conference
EuroBioC2024
Bioconductor
Community
EuroBioC
18 months ago
Maria Doyle
▴ 110
2
votes
4
replies
923
views
Bioconductor Submission question
Bioconductor
18 months ago
XFWu
• 0
0
votes
0
replies
614
views
News:
Annual Nominations Open for CAB and TAB! Deadline Aug 31
TAB
CAB
Bioconductor
19 months ago
shepherl
4.3k
0
votes
0
replies
607
views
EuroBioC2024 Flashtalks & Birds-of-a-Feather Sessions - submissions open!
Community
Conference
Bioconductor
EuroBioC2024
19 months ago
Maria Doyle
▴ 110
0
votes
4
replies
1.4k
views
featureCounts error: Assertion `numOfBuckets > 0' failed
featureCounts
Subread
Bioconductor
19 months ago
Jessica
• 0
1
vote
0
replies
995
views
News:
Bioconductor Package Download Rate Limitation (HTTP 429)
downloads
http429
http
Bioconductor
19 months ago
shepherl
4.3k
0
votes
2
replies
1.9k
views
Installing Bioconductor
Bioconductor
updated 19 months ago by
Lluís Revilla Sancho
▴ 760 • written 19 months ago by
mariyahgeorge14
• 0
0
votes
0
replies
686
views
News:
EuroBioC2024 Carpentries workshops Sep 2-3
Community
Workshop
Bioconductor
EuroBioC2024
20 months ago
Maria Doyle
▴ 110
0
votes
0
replies
672
views
News:
BioC2024 in-person registration closes soon (July 10)
BioC2024
Conference
Bioconductor
Community
20 months ago
Maria Doyle
▴ 110
0
votes
0
replies
983
views
Difference in Predictive component of PLS and OPLS Model
Metabolomics
plotGrouper
Bioconductor
ropls
PLSDAbatch
20 months ago
devarti.mahakalkar
• 0
0
votes
3
replies
1.1k
views
How to search Pubmed Central or other fulltext literature base using regex?
metaMSdata
Bioconductor
20 months ago
Abiologist
• 0
2
votes
2
replies
5.7k
views
Unable to install the package "tissuesGeneExpression"
bioconductor
updated 20 months ago by
Muhammad Abdullah
• 0 • written 8.6 years ago by
mdroog
▴ 10
0
votes
1
reply
914
views
BiomaRt listAttributes - which are external ?
Bioconductor
getBM
updated 20 months ago by
James W. MacDonald
68k • written 20 months ago by
Abiologist
• 0
922 results • Page
2 of 19
Recent ...
Replies
Answer: GSEA error
by
James W. MacDonald
68k
At a very high level, the way non-model organisms are annotated is by using blast to find orthologs in other species that are well annotate…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Comment: Unable to find ENTREZ IDs
by
Adithi
• 0
Hi James, Thank you so much for your reply. My main goal is to find ortholog genes from chinese hamster gene symbols to mouse gene symbols…
Answer: Unable to find ENTREZ IDs
by
James W. MacDonald
68k
Those are the 'symbols', and are a concatenation of LOC and the NCBI Gene ID (what used to be called an Entrez Gene ID). As an example:http…
Answer: Inconsistencies between accessor functions for TxDb databases with selected seql
by
a2a2hd42aa
• 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Votes
Answer: GSEA error
Answer: OrgDb for maize
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
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