Showing : FlowCore • reset
0
votes
0
replies
124
views
Macsquant FCS in read.FCS & opencyto
FlowCytometry flowWorkspace flowCore
8 weeks ago taylor.witte • 0
1
vote
1
reply
271
views
FCS3.2 reading
flowWorkspace flowCore CytoML
updated 7 weeks ago by ▴ 350 • written 3 months ago by ▴ 30
0
votes
0
replies
254
views
News: Online course - Flow cytometry data analysis with R/Bioconductor
flowDensity flowCore
4 months ago info ▴ 10
0
votes
6
replies
958
views
flowCore >2.0 read.FCS results in $SPILLOVER error when reading certain FCS files (could it be a warning?)
read.FCS flowCore
updated 5 months ago by ▴ 350 • written 5 months ago by • 0
1
vote
1
reply
403
views
How to read fcs3.2 files
flowCore
updated 5 months ago by 65k • written 5 months ago by ▴ 10
0
votes
2
replies
446
views
Cannot open Sysmex Partec CUbe 6 .fcs with read.FCS
Partec read.FCS flowCore
6 months ago mrescan • 0
0
votes
0
replies
405
views
Best method to manually add a cluster ID to a fcs or csv file
flowCore cytoMEM
10 months ago aguirre ▴ 20
0
votes
2
replies
516
views
Unable to access Git links.
Source flowCore Repository git
updated 12 months ago by 3.9k • written 12 months ago by • 0
0
votes
0
replies
370
views
Merging 2 staining panels
FlowCytometry flowCore
14 months ago michaela.gregorova13 • 0
0
votes
0
replies
506
views
write.FCS() produces files which cannot be opened by CytExpert software
flowCore
15 months ago pawel.malecki • 0
2
votes
1
reply
916
views
How to modify a compensation matrix in an fcs file
flowCore FlowCytometry
18 months ago aguirre ▴ 20
0
votes
0
replies
558
views
How to fix Flow-Data autoplot heat map
FlowCytometry flowCore openCyto ggcyto
18 months ago Dennis.hinkel • 0
2
votes
9
replies
1.5k
views
Error when plotting flow cytometry data
FlowCytometry flowCore ggcyto
updated 20 months ago by ▴ 350 • written 20 months ago by • 0
0
votes
0
replies
755
views
Error in the use of flowTrans: L-BFGS-B needs finite values of 'fn'
flowCore FlowCytometryData flowTrans flow
2.1 years ago hamiltond ▴ 10
0
votes
0
replies
930
views
FIXED: Using read.flowSet, getting a "no matching files found" error
flowCore FlowCytometryData
2.1 years ago hamiltond ▴ 10
0
votes
0
replies
730
views
Does flowCore::spillover() produce a spillover matrix or a compensation matrix?
flowCore
2.1 years ago nmchavez • 0
0
votes
0
replies
611
views
flowDensity Unable to find inherited method when given a flowFrame Object
flowCore flowDensity
2.2 years ago nmchavez • 0
0
votes
0
replies
564
views
Reducing/sampling number of FCS events
FlowCytometry flowCore
2.4 years ago markkelly1983 ▴ 20
2
votes
1
reply
880
views
Difference in output of logicle transform in different languages
flowCore
updated 2.2 years ago by • 0 • written 2.4 years ago by ▴ 20
0
votes
0
replies
704
views
Job: Bioconductor developer
FlowCytometry flowCore
2.4 years ago markkelly1983 ▴ 20
0
votes
1
reply
700
views
Error in flowCore::read.FCS(): Error in uint2double(splitted, endian == "big") : vector
read.FCS flowCore
2.5 years ago Rainer • 0
0
votes
1
reply
1.5k
views
how to get MFI stats from data
flowCore flowStats flowUtils flowWorkspace
updated 2.7 years ago by ★ 1.3k • written 3.0 years ago by • 0
0
votes
1
reply
876
views
Undefined columns error R cytometry analysis
flowCore ggcyto FlowCytometryData
updated 2.7 years ago by ★ 1.3k • written 3.1 years ago by • 0
0
votes
1
reply
1.2k
views
Re-naming $PnS parameters
flowCore
updated 3.2 years ago by ▴ 350 • written 3.2 years ago by • 0
2
votes
3
replies
1.0k
views
Getting number of datasets with flowCore
flowCore
updated 3.2 years ago by ▴ 350 • written 3.2 years ago by ▴ 10
1
vote
1
reply
1.4k
views
Error when using read.FCS
compensation flowCore FlowCore read.FCS
updated 3.3 years ago by ▴ 350 • written 3.3 years ago by • 0
0
votes
0
replies
668
views
flowCore - linear transformation
cytofWorkflow cytofworkflow flowCore
3.5 years ago GFM ▴ 20
1
vote
6
replies
1.4k
views
read.flowSet() raises " Argument 'phenoData' must be of type 'AnnotatedDataFrame'" error
flowCore
updated 3.5 years ago by ▴ 350 • written 3.5 years ago by • 0
0
votes
8
replies
1.7k
views
flowset/ncdfFlowset replace keywords doesn't work right
ncdfFlow flowCore
updated 8 months ago by • 0 • written 3.6 years ago by ▴ 30
3
votes
10
replies
2.4k
views
Reading multiple data segments from FCS 3.0 file
flowCore flow cytometry FCS 3.0 ncdfFlowSet
updated 24 months ago by ▴ 350 • written 4.0 years ago by ▴ 30
2
votes
2
replies
1.6k
views
Passing truncate_max_range=FALSE to read.ncdfFlowSet
ncdfFlow flowCore ncdfFlowSet read.FCS
updated 4.1 years ago by ▴ 310 • written 4.1 years ago by ▴ 30
4
votes
5
replies
1.1k
views
Calculate F measure to compare different gating approaches for a specific cell population
flowWorkspace flowCore openCyto flowFrame F-measure
updated 4.1 years ago by ▴ 310 • written 4.1 years ago by • 0
0
votes
1
reply
696
views
FlowCore openCyto: problem with summary(result)
flowCore openCyto Summary Result Filter
updated 4.0 years ago by ▴ 310 • written 4.1 years ago by • 0
0
votes
0
replies
592
views
Strange problem with parameter range when creating a flowFPModel
flowCore flowFP flowFPModel
4.2 years ago palffy.karoly • 0
0
votes
2
replies
938
views
flowCore not displaying FL gates
flowCore
updated 4.3 years ago by ★ 1.3k • written 4.3 years ago by • 0
2
votes
4
replies
1.1k
views
Mathematical operations in FCS file
flowCore flow cytometry
4.4 years ago chandra.swarnendu • 0
0
votes
1
reply
1.7k
views
Reproducing FlowJo Biexponential Transform in flowCore
flowCore
updated 4.5 years ago by ★ 1.3k • written 4.5 years ago by ▴ 10
1
vote
3
replies
1.2k
views
flowcore:::read.FCS does not read FCS3.1 correctly
flowcore
4.7 years ago cahyasu88 • 0
1
vote
0
replies
869
views
Cell cycle analysis subG1
flowploidy apoptosis cell cycle flowCore
4.8 years ago nina.hahn • 0
3
votes
2
replies
1.0k
views
flowWorkspace cannot load external data
flowWorkspace external data flowCore
4.8 years ago Brent.OCarrigan • 0
1
vote
2
replies
1.8k
views
flowCore issue: creating and applying new compensation matrix
compensate() flowCore
4.8 years ago rdlr • 0
0
votes
1
reply
754
views
Issue creating transformed filter in flowCore
flowCore
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
4
votes
4
replies
1.3k
views
FCSTransTransform() implementation in flowCore
flowCore FCSTrans flow cytometry
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by ▴ 80
3
votes
1
reply
2.0k
views
Convert Flowframe to matrix
flowcore fcs flow cytommetry matrix conversion
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
2
votes
3
replies
1.7k
views
how to use the flowCore spillover function
flowCore spillover gatingset2FlowJO
updated 4.9 years ago by ▴ 310 • written 4.9 years ago by • 0
1
vote
4
replies
1.6k
views
flowCore install missing a dependency?
flowCore Installation dependency
updated 5.0 years ago by ▴ 310 • written 5.0 years ago by ▴ 70
0
votes
0
replies
743
views
flowPloidy: how to visualize data on logarythmic x axis
flowPloidy flowcore flow cytometry
5.1 years ago kovacik • 0
1
vote
5
replies
1.7k
views
Flow cytometry optimization of transformation parameters
flow Cytometry flowCore flowTrans
5.2 years ago carlos.x.martinez-fleites • 0
1
vote
6
replies
2.3k
views
flowCore: uneven number of tokens / The last keyword is dropped.
flowCore
updated 5.2 years ago by ▴ 350 • written 5.2 years ago by • 0
1
vote
2
replies
977
views
gatingML examples needed
flowCore flowUtils gatingML
updated 5.2 years ago by ★ 1.3k • written 5.2 years ago by ▴ 10
50 results • Page 1 of 1
Recent ...
Replies
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by JKim • 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub? by Daniele • 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
Awards • All
Popular Question to Vincent J. Carey, Jr. 6.7k
Popular Question to Koen Van den Berge ▴ 180
Popular Question to shepherl 3.9k
Popular Question to Ken C • 0
Popular Question to Johannes Rainer ★ 2.0k
Locations • All
Hong Kong, 1 minute ago
Hong Kong, 8 minutes ago
Poland, 40 minutes ago
Greece, 51 minutes ago
WEHI, Melbourne, Australia, 1 hour ago
Traffic: 441 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6