Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
MassSpectrometry
•
reset
0
votes
4
replies
360
views
How to analyse RNA-based protein pulldown mass spectrometry data
Proteomics
limma
MassSpectrometry
11 months ago
barrypraveen
• 0
1
vote
2
replies
390
views
calculate theoretical isotope distribution give the AA sequence
Metabolomics
proteomics
MassSpectrometry
17 months ago
Oliver
• 0
0
votes
3
replies
388
views
Why I can not install rTANDEM?
MassSpectrometry
Proteomics
mzR
17 months ago
Gilad
• 0
2
votes
2
replies
2.0k
views
Thermo Xcalibur RAW data to MGF
mass spectrometry
massspectrometry
updated 4.0 years ago by
Laurent Gatto
1.5k • written 4.0 years ago by
hwu12
▴ 10
0
votes
1
reply
795
views
Metabolite identification package
xcms
massspectrometry
metabolomics
updated 4.1 years ago by
Johannes Rainer
★ 1.9k • written 4.1 years ago by
johnhamre3
• 0
0
votes
4
replies
907
views
Cannot install and load MSstats package
proteomics
massspectrometry
msstats
updated 4.1 years ago by
Laurent Gatto
1.5k • written 4.1 years ago by
zz298
• 0
2
votes
3
replies
1.0k
views
Imputation method selection (mass spectrometry) bimodal distribution
impute
missing value imputation
DEP
massspectrometry
updated 4.5 years ago by
Laurent Gatto
1.5k • written 4.5 years ago by
serpalma.v
▴ 60
1
vote
3
replies
1.8k
views
XCMS2 on MSMS data
xcms
metabolomics
massspectrometry
lipidomics
bioconductor
6.4 years ago • updated 6.3 years ago
Titan
• 0
0
votes
3
replies
1.4k
views
Problem with XCMS
xcms
metabolomics
lipidomics
proteomics
massspectrometry
6.4 years ago
Titan
• 0
0
votes
0
replies
1.1k
views
News:
4 days left to register for a short course on computational proteomics
proteomics
news
course
massspectrometry
News
7.2 years ago
Olga Vitek
▴ 40
0
votes
0
replies
939
views
Job:
Research Data Technician, Cambridge, UK
proteomics
massspectrometry
Job
7.3 years ago
Laurent Gatto
1.5k
25
votes
9
replies
5.0k
views
voom for spectral counts
limma
voom
proteomics
spectral counts
massspectrometry
updated 7.3 years ago by
Gordon Smyth
45k • written 7.3 years ago by
Ben Neely
▴ 40
2
votes
1
reply
1.2k
views
News:
Announcing a short course in computational and statistical proteomics
proteomics
massspectrometry
R
News
7.3 years ago
vitek.olga
▴ 20
0
votes
1
reply
1000
views
A package to analyse Quantitative proteomics study
massspectrometry
updated 7.5 years ago by
Laurent Gatto
1.5k • written 7.5 years ago by
Roopa Subbaiaih
▴ 130
1
vote
2
replies
1.5k
views
Problem with openMSfile in mzR
massspectrometry
7.6 years ago
meilan23
• 0
0
votes
1
reply
1.1k
views
Mass Spectrometry data analysis
MassSpectrometry
PRIDE
updated 7.6 years ago by
Laurent Gatto
1.5k • written 7.6 years ago by
paulamirini2008
• 0
16 results • Page
1 of 1
Recent ...
Replies
Comment: Can Differential Isoform expression analysis can be performed using DESeq2 packa
by
priyanka.m
• 0
Hi Michael, I performed Differential isoform expression analysis using Swish and have got some isoforms. I had previously performed the g…
Comment: CPM after RUVseq
by
James W. MacDonald
59k
Also, you might be confused about something. CPM is counts/million counts, which *uses library size to scale normalize* and logCPM is just…
Comment: CPM after RUVseq
by
James W. MacDonald
59k
You shouldn't use CPM or logCPM for any of the steps! To use `RUVr` you need to fit a preliminary model using `edgeR`, which takes counts a…
Comment: CPM after RUVseq
by
Jess
• 0
Thank you James! It hadn't occurred to me to input CPM rather than logCPM which is why my df$NormalizedCounts didn't exceed 17ish in valu…
Answer: RPX PXDataset error
by
Laurent Gatto
1.5k
- From the URL in the error, it looks like you have the latest (or a recent) `rpx` version. It is generally recommended to add the output o…
Votes
Answer: CPM after RUVseq
Comment: Merging two plated in R
Answer: Merging two plated in R
Answer: Merging two plated in R
A: Can we use glmQLFit instead of glmFit and then glmLRT in edgeR
Awards
• All
Teacher
to
Gordon Smyth
45k
Teacher
to
Aaron Lun
★ 27k
Scholar
to
James W. MacDonald
59k
Popular Question
to
Lluís Revilla Sancho
▴ 660
Centurion
to
Basti
▴ 280
Locations
• All
WEHI, Melbourne, Australia,
1 minute ago
New Zealand,
15 minutes ago
India,
17 minutes ago
Canada,
21 minutes ago
United States,
34 minutes ago
Traffic: 266 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6