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Protein
•
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0
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840
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Database/tool that is able to tell me if the glutathionylation of a protein inhibits it?
protein
database
glutathionylation
PTM
4.6 years ago
Camelia
• 0
0
votes
1
reply
1.6k
views
Normalisation of protein micro array data using VSN
microarray
normalization
protein
updated 5.2 years ago by
Wolfgang Huber
★ 13k • written 6.6 years ago by
keniajin
• 0
2
votes
2
replies
1.9k
views
Can't display protein domain data from UCSC table unipDomain using Gviz
Gviz
protein
visualization
UcscTrack
protein domains
updated 5.4 years ago by
James W. MacDonald
68k • written 5.4 years ago by
paul.jaschke
▴ 10
1
vote
4
replies
1.7k
views
package to analyze generic protein microarray data
microarray
protein
analysis
ProteomeProfiler
updated 5.9 years ago by
Gordon Smyth
53k • written 5.9 years ago by
hcnbox
• 0
0
votes
15
replies
3.8k
views
Is the STRINGdb server down?
STRINGdb
R
protein
updated 6.6 years ago by
zhanghongjie000
• 0 • written 6.8 years ago by
shahroze786
• 0
0
votes
1
reply
1.2k
views
Annotating protein sequences
Protein
iranges
sequencing
6.8 years ago
ieuangw
• 0
0
votes
1
reply
1.5k
views
Protein pathway analysis -- Classify, organize, and cluster a list of proteins / discovering relations between a set of proteins and linking them to …
protein
disease
pathway analysis
pathways
7.5 years ago
ረ
• 0
0
votes
1
reply
1.5k
views
How to identify Disease biomarkers " DNA sequences as biomarkers "
dnaseq
pathway analysis
protein
biomarkers
8.0 years ago
emadelhewihy
• 0
0
votes
0
replies
1.3k
views
batch blast matrix of protein sequences from R
R
blast
blastsequences
protein
8.0 years ago
andres.susrud
• 0
2
votes
4
replies
2.0k
views
plotting proteases digestion points in a protein
biostrings
iranges
sequence
alignment
protein
updated 9.0 years ago by
Michael Lawrence
★ 11k • written 9.0 years ago by
Assa Yeroslaviz
★ 1.5k
1
vote
2
replies
3.3k
views
Wrong protein sequence fetched with R's Biostrings readDNAStringSet function
biostrings
fasta
protein
updated 9.0 years ago by
James W. MacDonald
68k • written 9.0 years ago by
fastabest
• 0
1
vote
7
replies
3.1k
views
Can XCMS output continuum/profile data to netCDF format?
xcms
convert
protein
updated 9.1 years ago by
Johannes Rainer
★ 2.1k • written 9.1 years ago by
ray.bacala
• 0
0
votes
0
replies
1.5k
views
Job:
PhD Position in Bioinformatics
bioinformatics
protein
variantannotation
data integration
Job
9.2 years ago
stephan.pabinger
• 0
0
votes
5
replies
2.0k
views
Splitting a fasta file based on specific Amino acid for plotting
iranges
biostrings
fasta
protein
readaastringset
updated 9.2 years ago by
Michael Lawrence
★ 11k • written 9.2 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
0
replies
2.1k
views
Producing alternate protein sequences from VCF
protein
vcf
10.7 years ago
dan.gatti
• 0
15 results • Page
1 of 1
Recent ...
Replies
Answer: limpa analysis advice
by
Gordon Smyth
53k
It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…
Answer: When to use edgeR or limma
by
Gordon Smyth
53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry
by
Gordon Smyth
53k
I updated the above answer today.
Answer: When to use edgeR or limma
by
James W. MacDonald
68k
I would use edgeR's quasi-likelihood model for any analysis with a smaller number of observations (like 3 vs 3 or similar), but if you have…
Answer: limpa-blank normalization and Spectronaut's PTM stoichiometry
by
Gordon Smyth
53k
The short answer is that limpa reads standard feature-level intensities from Spectronaut or other quantifications tools. limpa is designed …
Votes
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
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