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Shiny
•
reset
0
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559
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Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny
EBImage
21 months ago
Wolfgang Huber
★ 13k
0
votes
1
reply
798
views
Error in ChAMP GUI
ChAMP
shiny
ChAMPdata
updated 2.1 years ago by
anna.stanislawska
• 0 • written 2.2 years ago by
Mari
• 0
0
votes
0
replies
756
views
Export Results from BatchQC Shiny App
BatchQC
RNA-seq
R
Shiny
batch-effect
4.0 years ago
manninm
• 0
0
votes
1
reply
937
views
AnnotationHub display() gives JavaScript Alert and DataTables warning
AnnotationHub
Shiny
Rstudio
updated 4.2 years ago by
shepherl
3.9k • written 4.2 years ago by
bwiley4
• 0
6
votes
0
replies
1.3k
views
News:
Winners of the 1st Shiny Contest: iSEE
iSEE
shiny
summarizedExperiment
News
5.1 years ago
Aaron Lun
★ 28k
0
votes
7
replies
1.5k
views
Problems with DESeq2 'design' parameter using Shiny/rhandsontable
deseq2
shiny
design
rhandsontable
hot_to_r()
updated 5.2 years ago by
Michael Love
41k • written 5.2 years ago by
hinkel2
• 0
0
votes
1
reply
1.9k
views
DEBrowser shiny - Maximum upload size exceeded - error
DEBrowser
shiny
5.3 years ago
tomasfly
• 0
0
votes
3
replies
1.4k
views
browseGenome with Shiny
rtracklayer
browsegenome
shiny
updated 5.6 years ago by
Michael Lawrence
★ 11k • written 5.6 years ago by
vivek82
• 0
12
votes
3
replies
6.0k
views
Error while uploading Bioconductor packages - R Shiny
shiny
package
deploy
6.1 years ago
lloyd.izard
▴ 80
3
votes
3
replies
1.3k
views
Sharing SC3_interactive results
SC3
single-cell
shiny
updated 7.0 years ago by
Vladimir Kiselev
▴ 150 • written 7.0 years ago by
cfustero
▴ 20
0
votes
1
reply
1.6k
views
News:
Plotly uprading issue in ChAMP package
ChAMP
Epigenetics
plotly
Shiny
GUI
News
7.5 years ago • updated 7.3 years ago
Yuan Tian
▴ 90
0
votes
1
reply
1.2k
views
R packages developed using shiny
shiny
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
bhakti.dwivedi
• 0
1
vote
1
reply
1.3k
views
reactive CellCODE heatmap
cellcode
shiny
heatmap
updated 8.0 years ago by
Andrzej Oleś
▴ 750 • written 8.0 years ago by
christopher.clarskon15
▴ 20
0
votes
1
reply
1.6k
views
shiny account on mac not deploying server
limmagui
shiny
8.1 years ago
christopher.clarskon15
▴ 20
7
votes
0
replies
3.7k
views
Tutorial:
New edX "Data analysis for Life Sciences" module: High performance computing for reproducible genomics
annotation
genomicranges
visualization
docker
shiny
Tutorial
8.2 years ago
Vincent J. Carey, Jr.
6.7k
0
votes
0
replies
1.8k
views
Shiny - error messages with validate
R
validate
shiny
8.6 years ago
alptaciroglu
▴ 50
1
vote
7
replies
2.7k
views
Shiny app for RefNet, PSICQUIC: annotated protein/protein interactions
shiny
network
interactions
9.5 years ago
pshannon
▴ 100
17 results • Page
1 of 1
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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