Biostar Splicing

Showing : Splicing • reset

votes

replies

1.8k

views

sgseq splicing alternative splicing

updated 6.9 years ago by Leonard Goldstein ▴ 110 • written 6.9 years ago by vakul.mohanty ▴ 10

votes

replies

1.3k

views

edger normalization differential exon usage splicing

updated 2.3 years ago by Yunshun Chen ▴ 780 • written 2.3 years ago by oakhamwolf • 0

votes

replies

1.2k

views

deseq2 splicing

updated 4.7 years ago by Michael Love 39k • written 4.7 years ago by yannickwurm • 0

vote

replies

1.1k

views

DRIMSeq splicing differential isoform usage

updated 6.0 years ago by Gosia Nowicka ▴ 90 • written 6.0 years ago by kristoffer.vittingseerup ▴ 20

vote

replies

1.1k

views

genomicalignments splicing coverage

updated 3.3 years ago by Michael Lawrence 11k • written 5.8 years ago by rasi1983 ▴ 10

vote

replies

1.4k

views

microarray splicing

updated 7.0 years ago by Sonika Tyagi ▴ 20 • written 8.3 years ago by gv ▴ 40

votes

replies

363

views

psichomics SUPPA Splicing Alternative Splicing Retained Introns

2.3 years ago noahhelton98 ▴ 20

votes

296

views

splicing Exon featureCounts subread DEXSeq

8 months ago NIK • 0

votes

replies

1.6k

views

SGSeq analyzeFeatures Splicing

8.1 years ago Paolo Guarnieri ▴ 20

votes

views

transcriptome splicing assembly

updated 10 weeks ago by James W. MacDonald 62k • written 10 weeks ago by Marianna • 0

votes

replies

1.1k

views

DEXSeq splicing python SAM

7.3 years ago Fiona ▴ 70

votes

777

views

ciri splicing splicesites

updated 3.0 years ago by lhddiallo • 0 • written 4.7 years ago by csijst • 0

votes

600

views

dexseq splicing sqtl qtl

updated 4.0 years ago by Alejandro Reyes ★ 1.8k • written 4.0 years ago by rtunney2 • 0

votes

486

views

junctionseq splicing RNAseq DEXSeq

3.2 years ago stuart ▴ 10

votes

replies

643

views

DEXSeq Splicing Exon Usage

3.0 years ago gunjan.dikshit • 0

15 results • Page 1 of 1

Recent ...

Replies

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE by Hervé Pagès 16k

See https://github.com/Bioconductor/GenomeInfoDb/issues/82#issuecomment-1409482932

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE by Hervé Pagès 16k

See https://github.com/Bioconductor/GenomeInfoDb/issues/82#issuecomment-1409482932

Comment: Sva and batch effect by Gordon Smyth 47k

(+1). I find that ComBat tends to introduce spurious differential expression so, you think there's a batch effect affecting the variances a…

Comment: Advice for the analysis of microarray data with limma by Gordon Smyth 47k

You mean references on orthogonal polynomials? Polynomial approximation is a classic topic in mathematics and statistics and there are many…

Comment: Limma-voom with inverse probability weights (similar to sample weights) by Gordon Smyth 47k

The potential problem isn't with empirical Bayes with the fact that the variance estimate from your method A linear model might not be mean…

Votes

Answer: Sva and batch effect

Answer: AnnotationForge::makeOrgPackage "argument is missing, with no default" Errors

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE

Answer: Limma-voom with inverse probability weights

Awards • All