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aec
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Recent ...
Replies
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM`
```
> library(Biostrings)
> data(HNF4alpha)
> libr…
Comment: DEseq2 coefficient
by
JKim
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Hi Dr. Love,
I'm sorry to ask another question to my old post.
If the design isn't balanced, the interpretation of coefficients will be…
Comment: Store output of matchPWM()
by
mat149
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out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges")))
Error in do.call(c, lapply(hitlist, function(x) as(x, "IRanges"))) :
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Answer: Store output of matchPWM()
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Something like this?
```
ind <- as.logical(sapply(hitlist, length))
out <- do.call(c, lapply(hitlist, function(x) as(x, "IRanges")))
…
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This has been asked before, but with a multi factor design, the LFC for coefficient X adjust for the others, in a way that is often hard to…
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