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experimentdata
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11
replies
1.5k
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News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
8 months ago • updated 18 days ago
shepherl
4.1k
1
vote
8
replies
1.7k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.6 years ago by
shepherl
4.1k
1
vote
1
reply
912
views
Confused about design for RNA seq experiment
RNAseq
ExperimentData
RNAseq123
RNA
ExperimentalDesign
updated 2.2 years ago by
ATpoint
★ 4.5k • written 2.2 years ago by
Mohamed
▴ 30
0
votes
5
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
3.1 years ago • updated 2.6 years ago
shepherl
4.1k
2
votes
2
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.9 years ago • updated 3.5 years ago
shepherl
4.1k
1
vote
2
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
4.1 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.7 years ago
shepherl
4.1k
0
votes
1
reply
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.8 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
5.0 years ago
shepherl
4.1k
0
votes
2
replies
2.0k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
5.1 years ago • updated 5.0 years ago
shepherl
4.1k
0
votes
0
replies
1.0k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
5.2 years ago • updated 5.1 years ago
shepherl
4.1k
0
votes
1
reply
1.2k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
5.3 years ago • updated 5.2 years ago
shepherl
4.1k
0
votes
3
replies
1.2k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
5.4 years ago
shepherl
4.1k
0
votes
1
reply
1.0k
views
News:
Initial List of Deprecated Packages Bioc 3.10
software
experimentdata
release
deprecation
annotation
News
5.5 years ago
shepherl
4.1k
0
votes
1
reply
1.4k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
5.7 years ago
shepherl
4.1k
0
votes
0
replies
1.2k
views
News:
DEADLINE: All packages to pass R CMD build and R CMD check
release
software
experimentdata
workflows
News
6.6 years ago
shepherl
4.1k
0
votes
0
replies
1.2k
views
How to load additional data from fcs files
fcs
concentration
experimentdata
7.5 years ago
jurg.spaak
• 0
0
votes
1
reply
1.8k
views
Extract the gate in the data file (fcs file) from MoFlo Astrios
gate
cytometry
experimentdata
stategy
MoFlo Astrios
7.8 years ago
cr
• 0
1
vote
2
replies
1.3k
views
Submitting an experimental data package
submit package
experimentdata
updated 8.7 years ago by
Martin Morgan
25k • written 8.7 years ago by
mark.dunning
▴ 20
1
vote
3
replies
1.7k
views
How to update the data in an experimental data package
experimentdata
update
updated 10.1 years ago by
Laurent Gatto
1.6k • written 10.1 years ago by
paul.theodor.pyl
▴ 10
0
votes
2
replies
3.3k
views
Biobase - Error: ExpressionSet
Microarray
Annotation
GO
ExperimentData
Biobase
Microarray
Annotation
GO
ExperimentData
updated 11.1 years ago by
Laurent Gatto
1.6k • written 11.1 years ago by
Lisa Cohen
▴ 50
0
votes
4
replies
9.7k
views
Error while building ExpressionSet from scratch....
ExperimentData
LMGene
ExperimentData
LMGene
updated 13.0 years ago by
Martin Morgan
25k • written 13.0 years ago by
Bas Jansen
▴ 150
0
votes
1
reply
1.5k
views
justRMA {affy} error
Annotation
ExperimentData
cdf
Annotation
ExperimentData
cdf
updated 13.2 years ago by
Martin Morgan
25k • written 13.2 years ago by
Julio Alejandro Di Rienzo
▴ 10
0
votes
2
replies
2.2k
views
RMA implemented in oligo package vs affy package
ExperimentData
cdf
affy
PROcess
oligo
ExperimentData
cdf
affy
PROcess
oligo
15.6 years ago
heyi xiao
▴ 360
0
votes
0
replies
1.5k
views
Beadarray error: comparison of types not implemented
Annotation
ExperimentData
beadarray
Annotation
ExperimentData
beadarray
15.6 years ago
Anne-Kristin Stavrum
▴ 10
0
votes
0
replies
1.4k
views
Beadarray error: comparison of types not implemented
Annotation
ExperimentData
Cancer
Biobase
beadarray
Annotation
ExperimentData
Cancer
15.6 years ago
Martin Morgan
25k
0
votes
3
replies
1.8k
views
ExpressionSet or MAList
Annotation
ExperimentData
Cancer
Annotation
ExperimentData
Cancer
updated 16.5 years ago by
Gordon Smyth
51k • written 16.5 years ago by
Daniel Brewer
★ 1.9k
0
votes
2
replies
1.8k
views
ReadAffy fails 64bit linux Error in .nextMethod(e1, e2) :
Annotation
ExperimentData
cdf
affy
Annotation
ExperimentData
cdf
affy
updated 16.6 years ago by
James W. MacDonald
67k • written 16.6 years ago by
Langdon W B
▴ 20
0
votes
3
replies
2.3k
views
ReadAffy Error
Annotation
ExperimentData
cdf
affy
affyio
Annotation
ExperimentData
cdf
affy
affyio
updated 17.2 years ago by
Sylvia.Merk@ukmuenster.de
▴ 60 • written 17.2 years ago by
Markus Schmidberger
▴ 380
0
votes
6
replies
3.6k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
updated 17.2 years ago by
Weiyin Zhou
▴ 220 • written 17.2 years ago by
Jenny Drnevich
★ 2.2k
0
votes
0
replies
1.9k
views
how to convert a AffyBatch into ExpressionSet object ?
Annotation
GO
Survival
ExperimentData
cdf
DynDoc
genefilter
geneplotter
multtest
affy
GO
17.2 years ago
Min Wook Kim
▴ 20
31 results • Page
1 of 1
Recent ...
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Thank you for your reply. I currently have batch-corrected data processed with scvi-tools (specifically, totalvi) and have followed the sam…
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I'd love to know if anyone has a workaround too. I've tried rolling back ChAMP and R to the previous versions that others have said work wi…
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Answer: Differential Expression Analysis with unbalanced batches without replication bet
by
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51k
> Is there an alternative model or approach in tools like edgeR, limma-voom, or DESeq2 or any other that can handle confounded batch effect…
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