Bioconductor Filter

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votes

replies

698

views

filter deseq2

updated 12 months ago by Michael Love 42k • written 13 months ago by PD • 0

vote

replies

910

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R filter limma Normalization Microarray

13 months ago Abdul ▴ 20

votes

552

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filter gate_quad_tmix gt_gating

2.2 years ago • updated 2.0 years ago Pierre • 0

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replies

3.8k

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loop filter

written 6.5 years ago by kritikamish99 ▴ 10

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694

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flowCore openCyto Summary Result Filter

updated 4.0 years ago by Jake Wagner ▴ 310 • written 4.1 years ago by noviello • 0

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1.3k

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RNA WGCNA filter

4.9 years ago modarzi ▴ 10

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779

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filter deseq2

updated 5.2 years ago by Michael Love 42k • written 5.2 years ago by charles.foster ▴ 160

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1.1k

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rtracklayer gff filter

updated 5.3 years ago by Michael Lawrence ★ 11k • written 5.3 years ago by alslonik • 0

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1.8k

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deseq2 filter genefilter

updated 6.5 years ago by Michael Love 42k • written 6.5 years ago by Björn • 0

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replies

3.2k

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DGElist filter edgeR

updated 6.9 years ago by Gordon Smyth 50k • written 6.9 years ago by alakatos ▴ 130

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1.3k

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limma filter genelist differential gene expression

updated 7.6 years ago by Gordon Smyth 50k • written 7.6 years ago by bi_Scholar • 0

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1.0k

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missing data filter

updated 8.4 years ago by James W. MacDonald 65k • written 8.4 years ago by rgescudero • 0

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1.3k

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flowcore gate subsetting filter

updated 8.7 years ago by Jiang, Mike ★ 1.3k • written 8.7 years ago by peterfoster ▴ 20

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2.7k

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probe filter subset gene symbol affy

9.2 years ago alakatos ▴ 130

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3.5k

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bioconductor mas5 perfectmatch affymetrixchip filter

updated 9.2 years ago by James W. MacDonald 65k • written 9.2 years ago by svlachavas ▴ 830

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3.1k

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deseq filter reads

9.3 years ago ccheung • 0

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1.3k

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variantannotation vcf fixed filter

9.3 years ago Anna N. • 0

17 results • Page 1 of 1

Recent ...

Replies

Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Marcel Ramos 690

`BiocManager` does not install local packages. It only installs Bioconductor, CRAN, and GitHub ones. You should install local packages w…

Comment: error running enricher from clusterprofiler by Yael • 0

It worked!!! Thanks alot, i think something in the gene_list wasnt right... Thanks agian

Comment: Create protein sequences including variants from a VCF file by Yun • 0

This cannot work for a SNV file, since `injectSNPs` need a `SNPlocs` object

Comment: Can log2cpm be used for proteomics data normalization? by Daniel • 0

Thank you for the quick reply and I apologize for it being on the wrong thread but the "post tag" function wasn't working properly.

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db") by Patadù ▴ 10

I have arranged the code again following the other post and also the script you suggested. Now, I managed to install `org.Vdahliae.eg.db`. …

Votes

Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Answer: Trim/Filter out-of-bounds GRanges

Comment: How to correctly adjust for gender in edgeR

Create protein sequences including variants from a VCF file

A: DEXSeq design formula

Awards • All

Scholar to Michael Love 42k

Popular Question to Vincent J. Carey, Jr. 6.7k