Showing : gui • reset
0
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12
replies
3.4k
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problems when trying to use biomaRt
GUI biomaRt GUI biomaRt
updated 14.1 years ago by ★ 2.0k • written 14.1 years ago by ▴ 50
0
votes
7
replies
1.8k
views
recipe for installing and using Bioconductor with Mac OS X 10.3 and R GUI 1.9
GUI GUI
20.1 years ago Marc Salit ▴ 80
0
votes
9
replies
2.0k
views
R IDE editor
GUI GUI
updated 12.0 years ago by ▴ 10 • written 12.0 years ago by ▴ 370
0
votes
5
replies
1.5k
views
Errors using biocLite on Apple OS X
GUI Cancer Breast Biobase GUI Cancer Breast Biobase
17.8 years ago Steven McKinney ▴ 310
0
votes
6
replies
1.6k
views
Re: fileBrowser
GUI cdf GUI cdf
updated 22.1 years ago by ▴ 530 • written 22.1 years ago by ★ 2.9k
0
votes
20
replies
2.8k
views
affy won't load
GUI affy GUI affy
15.9 years ago jason smith ▴ 50
0
votes
3
replies
1.4k
views
Installing Packages from Bioconductor: Error
GUI GUI
updated 19.4 years ago by ▴ 270 • written 19.4 years ago by ▴ 20
0
votes
7
replies
1.3k
views
bioconductor and ESS
GUI GUI
updated 19.2 years ago by ▴ 360 • written 19.2 years ago by ▴ 30
0
votes
3
replies
1.3k
views
maQualityPlots on Mac
GUI arrayQuality marray GUI arrayQuality marray
updated 17.7 years ago by ▴ 300 • written 17.7 years ago by 16k
0
votes
7
replies
1.4k
views
rMAT tutorial. Data file too large?
Preprocessing GUI rMAT Preprocessing GUI rMAT
14.0 years ago Patrick Schorderet ▴ 50
0
votes
3
replies
1.4k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI GUI
written 20.2 years ago by ▴ 50
0
votes
3
replies
1.3k
views
limma: print-tip loess and empty spots
Normalization GO GUI limma limmaGUI Normalization GO GUI limma limmaGUI
16.9 years ago Gordon Smyth 50k
0
votes
2
replies
1.3k
views
"limma" and "Imagene"
GUI limma limmaGUI GUI limma limmaGUI
updated 19.9 years ago by 50k • written 19.9 years ago by ▴ 50
0
votes
2
replies
979
views
newbie Q about object identity
GUI Biobase genefilter GUI Biobase genefilter
updated 16.6 years ago by 25k • written 16.6 years ago by ▴ 20
0
votes
3
replies
1.1k
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attributes of SAM files
GUI siggenes GUI siggenes
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 100
0
votes
3
replies
1.3k
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duplicate correlation of 4 "within array replicates" limmaGUI
GUI limma limmaGUI microRNA GUI limma limmaGUI microRNA
15.6 years ago Gordon Smyth 50k
0
votes
3
replies
1.9k
views
Error: 'devel' version requires a more recent R
GUI Cancer easyRNASeq GUI Cancer easyRNASeq
updated 11.5 years ago by 21k • written 11.5 years ago by ★ 2.0k
0
votes
3
replies
1.1k
views
getting closer on YEAST 2.0 annotation...
Annotation GUI Yeast probe Annotation GUI Yeast probe
updated 19.2 years ago by ★ 2.9k • written 19.2 years ago by ▴ 320
0
votes
2
replies
1.2k
views
Problems normalizing scanarray express data with limma
GUI limma a4 GUI limma a4
updated 12.3 years ago by 50k • written 12.3 years ago by ▴ 10
0
votes
3
replies
1.1k
views
R crashes after image array plots hgu133plus2 in R2.6.0
GUI hgu133plus2 affy limma affylmGUI GUI hgu133plus2 affy limma affylmGUI
updated 16.5 years ago by 25k • written 16.5 years ago by ★ 2.0k
0
votes
2
replies
1.3k
views
Installation Problems
GUI GUI
17.7 years ago McGee, Monnie ▴ 300
0
votes
3
replies
781
views
Bioconductor 2.4 is released
GUI GUI
updated 14.8 years ago by ▴ 10 • written 14.8 years ago by ▴ 10
1
vote
2
replies
3.3k
views
edgeR: error in readDGE
GUI edgeR GUI edgeR
updated 13.5 years ago by ★ 13k • written 13.5 years ago by ▴ 10
0
votes
3
replies
2.1k
views
Error: package/namespace load failed for ‘affycoretools
GO GUI Cancer GO GUI Cancer
updated 11.4 years ago by ★ 13k • written 11.4 years ago by ★ 2.0k
0
votes
3
replies
1.2k
views
Database for Microarray Data - request for user stories
Microarray Annotation GUI probe Microarray Annotation GUI probe
updated 18.4 years ago by ▴ 50 • written 18.4 years ago by ▴ 320
0
votes
2
replies
906
views
affy still not working
GUI affy GUI affy
updated 21.2 years ago by ★ 3.9k • written 21.2 years ago by ▴ 20
0
votes
1
reply
1.2k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI Cancer GUI Cancer
written 20.2 years ago by ▴ 810
0
votes
3
replies
1.2k
views
ShortRead report function crash in x86_64-apple
GUI GUI
written 14.0 years ago by ▴ 20
0
votes
1
reply
1.3k
views
iFlow
GUI GUI
updated 14.0 years ago by ★ 1.6k • written 14.0 years ago by ▴ 70
0
votes
1
reply
664
views
Top 50 Candidate genes: "wrong" pValues and B results!
GUI limma GUI limma
updated 19.8 years ago by 50k • written 19.8 years ago by ▴ 30
0
votes
1
reply
1.1k
views
Agi4x44PreProcess - Replicated genes
Annotation GUI probe Agi4x44PreProcess Annotation GUI probe Agi4x44PreProcess
updated 14.5 years ago by ★ 1.3k • written 14.5 years ago by ▴ 460
0
votes
1
reply
889
views
Problems using rMAT tutorial
GUI rMAT GUI rMAT
updated 14.0 years ago by ★ 13k • written 14.0 years ago by ▴ 50
0
votes
1
reply
936
views
iFlow error
GUI iFlow GUI iFlow
updated 14.0 years ago by ★ 1.6k • written 14.0 years ago by ▴ 70
0
votes
1
reply
948
views
Rgraphviz in windows 7 - problem with GUI?
GUI graph Rgraphviz GUI graph Rgraphviz
updated 13.8 years ago by 16k • written 13.8 years ago by ▴ 10
0
votes
1
reply
1.1k
views
asMatrixWeights: weights of unexpected shape
GUI limma limmaGUI GUI limma limmaGUI
updated 15.6 years ago by ▴ 90 • written 15.6 years ago by 50k
0
votes
3
replies
3.6k
views
Error installing impute package
GUI impute DNAcopy GUI impute DNAcopy
updated 9.9 years ago by ★ 8.2k • written 9.9 years ago by ▴ 80
0
votes
1
reply
683
views
GUI designing
GUI GUI
updated 15.2 years ago by ▴ 620 • written 15.2 years ago by ▴ 10
0
votes
2
replies
1.3k
views
An ESR essay about software design, and how it applies to Bioconductor
GUI GUI
updated 19 months ago by • 0 • written 20.2 years ago by ▴ 30
0
votes
1
reply
1.1k
views
FYI from apple employee RE: [R] Memory error in Mac OS X
GUI trigger GUI trigger
updated 19.1 years ago by ▴ 430 • written 19.1 years ago by ▴ 10
0
votes
1
reply
1.1k
views
Error in isVersioned(object)
GUI GUI
updated 10.1 years ago by 25k • written 10.1 years ago by ★ 13k
0
votes
1
reply
771
views
problem upgrading limma on Windows Vista
GUI limma GUI limma
updated 16.2 years ago by 65k • written 16.2 years ago by ▴ 50
0
votes
2
replies
1.6k
views
Help with loading newly created custom annotation db into R session
Annotation GO GUI zebrafish probe Annotation GO GUI zebrafish probe
updated 15.3 years ago by 65k • written 15.3 years ago by ▴ 300
0
votes
1
reply
713
views
Installing R
GO GUI PROcess GO GUI PROcess
updated 19.2 years ago by ▴ 430 • written 19.2 years ago by ▴ 10
0
votes
1
reply
1.1k
views
FYI from apple employee RE: [R] Memory error in Mac OS X Aqua GUI v1.01 with cluster
GUI trigger GUI trigger
updated 19.2 years ago by ▴ 430 • written 19.2 years ago by ▴ 50
0
votes
2
replies
1.3k
views
Memory error in Mac OS X Aqua GUI v1.01 with cluster package functions
GUI trigger GUI trigger
updated 19.2 years ago by 65k • written 19.2 years ago by ▴ 50
0
votes
1
reply
718
views
Error in the Oligo package with pd.mapping50k.xba240
GUI oligo GUI oligo
updated 16.9 years ago by ★ 7.4k • written 16.9 years ago by ▴ 40
0
votes
1
reply
1.1k
views
tkctk widgets
GUI annotate affy GUI annotate affy
updated 22.1 years ago by ★ 2.9k • written 22.2 years ago by ★ 5.5k
0
votes
1
reply
700
views
Problem with limma gui and sma
GUI limma GUI limma
updated 19.5 years ago by 65k • written 19.5 years ago by ▴ 30
0
votes
1
reply
1.1k
views
Re-scaling MA plot Y axis in LimmaGUI?
GUI limma limmaGUI GUI limma limmaGUI
18.4 years ago J.delasHeras@ed.ac.uk ★ 1.9k
0
votes
2
replies
982
views
Error in loading bioconductor packages in Rterm and ESS+XEmacs modes
GUI GUI
updated 21.1 years ago by ★ 3.9k • written 21.1 years ago by ▴ 20
50 results • Page 1 of 1
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Comment: Why does GSEA on edgeR results for randomized samples give highly significant p- by gene_bioconductor ▴ 10
Thanks for your thoughtful and detailed comment, Gordon
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Poonam • 0
I looked into the genomic distributions. Please see the screenshot attatched ![ distrubution for female loci, boot1 and boot2][1] how do …
Answer: How to save the DEXSeq results by Michael Love 41k
If you look at the output here: https://bioconductor.org/packages/release/bioc/vignettes/DEXSeq/inst/doc/DEXSeq.html#4_Testing_for_differe…
Answer: Method to find pathways different between 2 groups by Robert Castelo ★ 3.3k
Hi, regarding how could you combine the result from each tool, one option is using a so-called "ensembl method", for instance, the package …
Answer: Couldn't connect to server while using "pathways" by James W. MacDonald 65k
As ATpoint already noted, you should proceed from the assumption that your audience knows nothing about what you are doing, and provide eno…
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Answer: Method to find pathways different between 2 groups
Answer: Method to find pathways different between 2 groups
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Answer: Method to find pathways different between 2 groups
Comment: Trying to use enrichGO
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