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Showing :
gviz
•
reset
2
votes
32
replies
4.9k
views
Gviz error 'Expectation Failed'
gviz
ucsc
8.0 years ago • updated 7.9 years ago
Tom
▴ 10
28
votes
25
replies
5.9k
views
[FIXED] Error in Gviz (actually, rtracklayer) | IdeogramTrack
Gviz
rtracklayer
updated 6.8 years ago by
aina.jene
▴ 10 • written 7.3 years ago by
Ramiro Magno
▴ 100
5
votes
14
replies
4.9k
views
gene symbols in Gviz
Gviz
8.9 years ago
Bogdan
▴ 670
0
votes
12
replies
2.1k
views
Gviz: feature protein_coding not working
gviz
biomart
updated 7.8 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.8 years ago by
Simon B.
• 0
6
votes
11
replies
2.5k
views
Gviz ChromHMM colouring for AnnotationTracks
gviz
chromHMM
updated 6.5 years ago by
Tiphaine Martin
▴ 40 • written 7.5 years ago by
gammyknee
▴ 10
0
votes
11
replies
1.9k
views
Givz Doesn't plot coverage genetracks that are aligned against ensemble ref
gviz
6.6 years ago
ta_awwad
▴ 10
3
votes
10
replies
3.0k
views
Gviz: How to color parts of transcript in BiomartGeneRegionTrack?
gviz
updated 7.5 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.3 years ago by
stianlagstad
▴ 90
3
votes
10
replies
2.0k
views
Shifted dashed frame in Gviz boxplot
gviz
boxplot
updated 8.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.1 years ago by
enricoferrero
▴ 660
2
votes
9
replies
1.9k
views
Gviz: decreasing tick resolution
gviz
gviz-package
updated 5.4 years ago by
Robert Ivanek
▴ 730 • written 5.4 years ago by
willbradshaw
• 0
0
votes
9
replies
1.2k
views
GVIZ stacking error
gviz
4.8 years ago
d.depledge
• 0
1
vote
9
replies
2.2k
views
Gviz IdeogramTrack Hsapiens/Mmusculus error
gviz
9.0 years ago • updated 8.9 years ago
Merienne Nicolas
▴ 120
0
votes
8
replies
2.1k
views
Gviz and AnnotateTrack and memory usage
gviz
updated 8.9 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.3 years ago by
Bogdan
▴ 670
0
votes
8
replies
2.1k
views
Gviz - Plot genes and data from - strand (3'-5') in 5'-3' direction
Gviz
Gviz
updated 10.7 years ago by
Robert Ivanek
▴ 730 • written 10.7 years ago by
Jager, Dominik
▴ 50
3
votes
8
replies
1.7k
views
How to plot transcript biotype annotation into GVIZ?
gviz
7.7 years ago
tiago211287
▴ 10
1
vote
7
replies
2.0k
views
Gviz: reducing whitespace around tracks
gviz
updated 19 months ago by
Elise
• 0 • written 7.8 years ago by
jdbowes
• 0
0
votes
7
replies
2.4k
views
question about Gviz
Gviz
Gviz
11.3 years ago
Bogdan
▴ 670
0
votes
7
replies
4.4k
views
gviz: controlling track labels
gviz
7.8 years ago
Janet Young
▴ 740
6
votes
7
replies
3.0k
views
Error: Failed to set session genome to...
gviz
rtracklayer
updated 8.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.0 years ago by
liz.ingsimmons
▴ 140
1
vote
7
replies
1.8k
views
Gviz for Rnor_6
gviz
updated 7.9 years ago by
James W. MacDonald
66k • written 7.9 years ago by
motutaj
• 0
5
votes
7
replies
1.8k
views
Gviz: How to plot UTRs with GRanges object?
gviz
updated 8.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.0 years ago by
stianlagstad
▴ 90
1
vote
6
replies
4.1k
views
Gviz issue: crashing when AnnotationTrack( ... , just.group="above")
software error
bug
crash
Gviz
updated 7.8 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.9 years ago by
Philip Lijnzaad
▴ 160
3
votes
6
replies
2.7k
views
Gviz: AlignmentsTrack from a bam file with non-UCSC chromosome names
gviz
updated 7.4 years ago by
Johannes Rainer
★ 2.0k • written 8.3 years ago by
stianlagstad
▴ 90
0
votes
6
replies
1.9k
views
IdeogramTrack and bigWig file errors in Gviz
ChIPSeq
GO
rtracklayer
CAMERA
chipseq
Gviz
ChIPSeq
GO
rtracklayer
CAMERA
chipseq
Gviz
updated 11.1 years ago by
Robert Ivanek
▴ 730 • written 11.1 years ago by
Guest User
★ 13k
0
votes
6
replies
2.3k
views
Gviz: axes related parameters
Coverage
Gviz
Coverage
Gviz
updated 10.2 years ago by
Steve Lianoglou
★ 13k • written 10.2 years ago by
Maxim
▴ 170
0
votes
6
replies
2.7k
views
Displaying very deep coverage in Gviz
Coverage
Gviz
Coverage
Gviz
updated 10.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 10.0 years ago by
Lance Parsons
▴ 130
2
votes
6
replies
2.8k
views
IdeogramTrack from Gviz with chromosome name "4" rather "chr4"
Gviz
updated 8.8 years ago by
Robert Ivanek
▴ 730 • written 8.8 years ago by
tangming2005
▴ 190
0
votes
6
replies
2.9k
views
Gviz::plotTracks for BiomartGeneRegionTrack() produces empty plots
gviz
visualization
9.3 years ago
Asta Laiho
▴ 120
2
votes
6
replies
1.8k
views
Gviz color alignments by read strand
Gviz
updated 5.4 years ago by
Robert Ivanek
▴ 730 • written 5.6 years ago by
Chris Stubben
▴ 40
3
votes
6
replies
1.8k
views
gviz ideogramTrack connection error
gviz-package
gviz
updated 6.3 years ago by
Robert Ivanek
▴ 730 • written 6.3 years ago by
alperyilmaz
▴ 20
0
votes
6
replies
1.8k
views
Gviz/Biostrings memory issue?
gviz
biostrings
7.5 years ago
stianlagstad
▴ 90
2
votes
6
replies
4.6k
views
Gviz Color Filling
Gviz
updated 7.7 years ago by
florian.hahne@novartis.com
★ 1.6k • written 7.7 years ago by
dustar1986
▴ 10
2
votes
6
replies
3.7k
views
Gviz change color of groups
gviz-package
gviz
updated 5.8 years ago by
florian.hahne@novartis.com
★ 1.6k • written 5.9 years ago by
franceschini.gianmarco
• 0
2
votes
5
replies
2.2k
views
GVIZ shows error if plotting only one id
gviz
updated 8.9 years ago by
dbrawand
• 0 • written 9.1 years ago by
tonja.r
▴ 80
3
votes
5
replies
1.7k
views
UcscTrack and BED without headers
gviz
BED
Ucsc
UcscTrack
8.4 years ago
Andy91
▴ 60
2
votes
5
replies
1.9k
views
Gviz - display/indicate soft-clipped bases - indicate supplementary alignments
gviz
bam
pacbio
updated 8.0 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.0 years ago by
thackl
• 0
0
votes
5
replies
2.3k
views
Gviz - BiomartGeneRegionTrack and gene symbol
gviz
8.3 years ago
romain.fenouil
▴ 10
1
vote
5
replies
1.6k
views
Gviz single side margin for plotTracks
gviz
grid
layout
updated 5.4 years ago by
Robert Ivanek
▴ 730 • written 5.5 years ago by
alex.gos90
▴ 10
1
vote
5
replies
2.7k
views
plotting interactions in gviz (Chia-Pet, HiC, 5C). New feature?
gviz
updated 9.2 years ago by
Robert Ivanek
▴ 730 • written 9.3 years ago by
doyourun
• 0
1
vote
5
replies
2.2k
views
Gviz AlignmentTrack problem
Gviz
updated 8.1 years ago by
Robert Ivanek
▴ 730 • written 8.1 years ago by
yuyaxuan0
• 0
1
vote
5
replies
1.0k
views
Plotting DMRs (Differentially Methylated Regions) using Gviz package in R
Gviz
updated 4.3 years ago by
James W. MacDonald
66k • written 4.3 years ago by
sinha.puja
▴ 10
4
votes
5
replies
2.4k
views
Gviz: Plot only exons?
gviz
8.1 years ago
stianlagstad
▴ 90
0
votes
5
replies
1.3k
views
error when plotting aligned reads depending on the length of the displayed region
gviz
plottracks
alignmentstrack
updated 7.3 years ago by
hesham.gibriel
• 0 • written 7.3 years ago by
TimothéeFlutre
▴ 80
1
vote
5
replies
2.5k
views
how to plot human genome chromosome Ideogram with each length by Gviz
Gviz
chromosome
ideogram
updated 7.2 years ago by
bernatgel
▴ 150 • written 7.2 years ago by
dulunar
▴ 10
2
votes
5
replies
2.6k
views
Plot data from VCF using Gviz?
gviz
variantannotation
vcf
updated 8.5 years ago by
Valerie Obenchain
★ 6.8k • written 8.5 years ago by
Johannes Rainer
★ 2.0k
0
votes
5
replies
3.5k
views
Gviz AnnotationTrack - Consistent y-scales
Coverage
Annotation
graph
Gviz
Coverage
Annotation
graph
Gviz
updated 10.1 years ago by
Lance Parsons
▴ 130 • written 10.1 years ago by
Aliaksei Holik
▴ 350
2
votes
5
replies
1.7k
views
Error loading Gviz package object path is not exported by namespace:Rsamtools
gviz
rsamtools
updated 5.3 years ago by
solutionsweb770
• 0 • written 5.4 years ago by
frequena.sanchez
• 0
0
votes
5
replies
1.8k
views
Gviz: UcscTrack and "GC Percent" information
Gviz
coMET
17 months ago • updated 7 months ago
Daniel E. Weeks
▴ 30
0
votes
4
replies
1.7k
views
Gviz IdeogramTrack fails with Error: failed to load HTTP resource
gviz
gviz-package
rtracklayer
http
6.3 years ago
enricoferrero
▴ 660
1
vote
4
replies
2.6k
views
It is possible to use Gviz without a valid UCSC genome?
gviz
UCSC
updated 8.5 years ago by
florian.hahne@novartis.com
★ 1.6k • written 8.5 years ago by
Vinicius Henrique da Silva
▴ 40
0
votes
4
replies
1.8k
views
Marking and annotating several SNPs on Ideogram track by Gviz package.
gviz
ideogram
snps
updated 9.3 years ago by
florian.hahne@novartis.com
★ 1.6k • written 9.3 years ago by
vnyirongo
• 0
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