Bioconductor Igraph

Showing : igraph • reset

votes

627

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GRanges igraph

updated 15 months ago by Lluís Revilla Sancho ▴ 730 • written 15 months ago by Bogdan ▴ 670

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528

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WGCNA igraph

17 months ago María José • 0

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1.1k

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igraph networkanalysis Phylogenetics phyloseq

3.3 years ago Chantel • 0

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2.9k

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R 3.6.2 update problems with igraph and phangorn update Phyloseq igraph phangorn Tutorial

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by crgarcia • 0

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1.5k

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igraph network gene corexpression rna-seq

updated 2.7 years ago by Gordon Smyth 50k • written 5.1 years ago by aiswaryabioinfo • 0

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1.2k

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STRINGdb igraph

5.1 years ago Samuel Lee • 0

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1.4k

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scater scran igraph scRNA-Seq rots

updated 5.2 years ago by Aaron Lun ★ 28k • written 5.2 years ago by hamza_karakurt ▴ 50

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908

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igraph miR2Pathway Pathway page_rank

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by genomic8328 ▴ 10

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994

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graph pathways igraph

6.1 years ago genomic8328 ▴ 10

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3.3k

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igraph

6.6 years ago • updated 6.5 years ago Andrew Box ▴ 10

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1.5k

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QuACN igraph

6.8 years ago lljotall ▴ 10

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2.0k

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igraph spade

updated 6.9 years ago by johnheath346 • 0 • written 8.4 years ago by duncanjamesmurray01 • 0

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1.6k

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installation package installation topaseq igraph LD_LIBRARY_PATH

7.3 years ago jan.soderman • 0

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967

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ppi network analysis igraph

7.9 years ago Abhishek Pratap ▴ 190

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1.2k

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igraph software error adjacency matrix

updated 8.0 years ago by Paul Shannon ▴ 470 • written 8.0 years ago by Angel ▴ 40

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1.2k

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RamiGO R gene ontology igraph

8.2 years ago bkellman • 0

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2.7k

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igraph

updated 8.3 years ago by Hervé Pagès 16k • written 8.3 years ago by Angel ▴ 40

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1.9k

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FEM igraph

updated 8.5 years ago by andrew • 0 • written 8.5 years ago by sirintra ▴ 10

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2.0k

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software error geNet igraph genetclassifier

updated 8.8 years ago by saibar ▴ 20 • written 8.8 years ago by alakatos ▴ 130

19 results • Page 1 of 1

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Replies

Comment: Extremely small p-values using Limma for proteomic data by James W. MacDonald 65k

If you ever find yourself using the `@` function, you should reconsider what you are doing. There are vanishingly small instances when an e…

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 42k

Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>

Comment: How to use spike-in information (sequences from another species) with DESeq2::DE by maria.soler • 0

Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…

Answer: Differential gene expression analysis results by ATpoint ★ 4.1k

Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…

Comment: deseq2 results by sajadahmad41454 • 0

thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.