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5.7k

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limma pvalue log2fc log2

updated 17 months ago by James W. MacDonald 65k • written 8.1 years ago by serpalma.v ▴ 60

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1.9k

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Log2 edgeR RNA limma Normalization

17 months ago Sara • 0

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1.4k

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DESeq2 log2 normalized counts

updated 14 months ago by James W. MacDonald 65k • written 14 months ago by Laia ▴ 10

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3.0k

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limma export log2 data agilent

updated 9.5 years ago by James W. MacDonald 65k • written 9.5 years ago by Jahn Davik ▴ 110

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1.4k

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normalized counts log2

5.6 years ago agdif ▴ 10

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1.9k

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log2 RMA Affymetrix affy Normalization

updated 3.2 years ago by Kevin Blighe ★ 3.9k • written 3.2 years ago by Lara • 0

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887

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edgeR RNA-Seq log2 foldchange q_value

updated 2.3 years ago by Gordon Smyth 50k • written 2.3 years ago by johndavidgriner74 • 0

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2.6k

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log2 DESeq2

21 months ago User000 • 0

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927

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mfuzz fold change log2 STANDARDISATION

5.8 years ago prakashpandey1111 • 0

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783

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NMF log2 classification bioconductor

5.9 years ago Seymoo • 0

10 results • Page 1 of 1

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

Votes

Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

Supporter to JKim • 0