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methyanalysis
•
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925
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression
methyAnalysis
MethylationArray
5.0 years ago
coobzie
• 0
1
vote
2
replies
1.9k
views
Methylation data visualization using methyAnalysis with minfi
methylation
microarray
illumina
minfi
methyanalysis
updated 6.9 years ago by
Ou, Jianhong
★ 1.3k • written 6.9 years ago by
Adam_M
• 0
0
votes
0
replies
1.0k
views
methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
7.8 years ago
mcahn
• 0
2
votes
4
replies
3.5k
views
Problem in installing Bioconductor packages due to "IRanges"
lumi
methylumi
methyAnalysis
7.9 years ago
topijush
▴ 10
0
votes
0
replies
1.2k
views
Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
8.0 years ago
charleneee95
• 0
1
vote
9
replies
4.7k
views
strange results from differential methylation analysis using limma
limma
methylation
methyanalysis
IMA
updated 3.5 years ago by
Sean Davis
21k • written 8.7 years ago by
RC
• 0
0
votes
0
replies
1.3k
views
methyAnalysis: heatmapByChromosome not works
methyAnalysis
9.1 years ago
Shicheng Guo
• 0
0
votes
1
reply
1.3k
views
problem with identifySigDMR command
methyAnalysis
9.3 years ago
yuping.zhang
• 0
0
votes
0
replies
2.0k
views
methyAnalysis error with example data
methyanalysis
9.5 years ago
Tom
▴ 10
4
votes
10
replies
5.5k
views
Illumina MethylationEPIC vs. 450K
methylumi
minfi
illuminahumanmethylation450k.db
450k
methyanalysis
updated 9.7 years ago by
Peter Hickey
▴ 760 • written 9.7 years ago by
Ahdee
▴ 60
1
vote
13
replies
3.0k
views
MethylAid package visualize function not opening a web browser
illimina 450k methylation
methyanalysis
methylaid
10.1 years ago
jdangelo
• 0
0
votes
1
reply
5.1k
views
methyAnalysis M values and Beta Values
methyAnalysis
methyanalysis
450k
updated 10.7 years ago by
Pan Du
▴ 80 • written 10.7 years ago by
andrew.j.skelton73
▴ 370
1
vote
5
replies
1.8k
views
Understanding methyAnalysis Results
methyAnalysis
methyanalysis
methylation
illuminahumanmethylation450k.db
updated 10.7 years ago by
Pan Du
▴ 80 • written 10.7 years ago by
andrew.j.skelton73
▴ 370
0
votes
0
replies
2.1k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
11.7 years ago
Allegra Petti
▴ 120
0
votes
8
replies
3.0k
views
methyAnalysis for DMR identification
convert
methyAnalysis
convert
methyAnalysis
updated 11.7 years ago by
Giovanni Calice
▴ 160 • written 11.7 years ago by
Guest User
★ 13k
0
votes
6
replies
3.7k
views
DMR identification: minfi speed, memory problems
Annotation
convert
minfi
methyAnalysis
bumphunter
Annotation
convert
minfi
methyAnalysis
updated 11.7 years ago by
James W. MacDonald
68k • written 11.7 years ago by
Guest User
★ 13k
0
votes
0
replies
2.0k
views
Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer
charm
minfi
methyAnalysis
Cancer
charm
minfi
methyAnalysis
12.7 years ago
Ed Schwalbe
▴ 20
0
votes
2
replies
1.6k
views
genoset:::initGenoSet
methyAnalysis
methyAnalysis
updated 12.8 years ago by
Pan Du
▴ 440 • written 12.8 years ago by
Schalkwyk, Leonard
▴ 20
0
votes
2
replies
2.1k
views
Loading Data into MethyAnalysis
Microarray
methyAnalysis
Microarray
methyAnalysis
updated 12.8 years ago by
Pan Du
▴ 440 • written 12.8 years ago by
Guest User
★ 13k
0
votes
1
reply
1.3k
views
methyAnalysis methyGenoSet function
methyAnalysis
methyAnalysis
updated 12.9 years ago by
Sean Davis
21k • written 12.9 years ago by
Giancarlo
▴ 10
0
votes
0
replies
1.4k
views
importing data problem with methyAnalysis package
Biophysics
Annotation
Preprocessing
annotate
lumi
methyAnalysis
Biophysics
Annotation
lumi
12.9 years ago
Pan Du
▴ 440
21 results • Page
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Replies
Answer: mzR-Rcpp compiler version issue
by
Laurent Gatto
1.6k
There are two issues here. First, a warning about mzR, that you can safely ignore. It tells you that mzR was compiled using a different …
Comment: Identifying differentially expressed genes in individual samples from a large co
by
jamie.gearing
▴ 60
Great. Yes, something descriptive is probably good enough, even if the p-values themselves are not so rigorous. Thanks very much Gordon!
Comment: Co-occurrence Network Analysis between Algae and Bacteria
by
Stefano Mangiola
▴ 40
Just a placeholder, that we are extending `sccomp` to co-occurrence analyses. Yours could be a good use-case to test first. We will be in t…
Answer: DESeq2 design for haplotype MPRA
by
aimesd808
• 0
I appreciate you telling me about this. Now it's crystal plain to me. Publish this: https://support.bioconductor.org/p/9162649/
Answer: Extract snp information from genomic regions with biomaRt -> "oaries_snp"
by
Kevin Blighe
★ 4.0k
My sincere apologies that my colleagues had ignored your question. The error occurs because the "chromosomal_region" filter is not valid…
Votes
Answer: Identifying differentially expressed genes in individual samples from a large co
Answer: Identifying differentially expressed genes in individual samples from a large co
Bioconductor Seminar Series - Dec 2: Deep-learning Gene Perturbation Effect Prediction
Comment: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
Comment: Error installing Seqinfo
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