Showing : methyanalysis • reset
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Diffrential Gene expression in a group of specific methylated prometor patience
GeneExpression methyAnalysis MethylationArray
5.2 years ago coobzie • 0
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2
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1.9k
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Methylation data visualization using methyAnalysis with minfi
methylation microarray illumina minfi methyanalysis
updated 7.1 years ago by ★ 1.3k • written 7.1 years ago by • 0
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methyAnalysis - library(methyAnalysis) hangs when talking to Internet
methyanalysis
8.0 years ago mcahn • 0
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4
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3.6k
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Problem in installing Bioconductor packages due to "IRanges"
lumi methylumi methyAnalysis
8.0 years ago topijush ▴ 10
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Recurring error in smoothMethygenoset step for MethyAnalysis
methyanalysis
8.2 years ago charleneee95 • 0
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4.9k
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strange results from differential methylation analysis using limma
limma methylation methyanalysis IMA
updated 3.7 years ago by 21k • written 8.9 years ago by • 0
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methyAnalysis: heatmapByChromosome not works
methyAnalysis
9.3 years ago Shicheng Guo • 0
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1.3k
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problem with identifySigDMR command
methyAnalysis
9.5 years ago yuping.zhang • 0
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2.0k
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methyAnalysis error with example data
methyanalysis
9.7 years ago Tom ▴ 10
4
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10
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5.7k
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Illumina MethylationEPIC vs. 450K
methylumi minfi illuminahumanmethylation450k.db 450k methyanalysis
updated 9.9 years ago by ▴ 760 • written 9.9 years ago by ▴ 60
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13
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3.2k
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MethylAid package visualize function not opening a web browser
illimina 450k methylation methyanalysis methylaid
10.3 years ago jdangelo • 0
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5.3k
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methyAnalysis M values and Beta Values
methyAnalysis methyanalysis 450k
updated 10.9 years ago by ▴ 80 • written 10.9 years ago by ▴ 370
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5
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2.0k
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Understanding methyAnalysis Results
methyAnalysis methyanalysis methylation illuminahumanmethylation450k.db
updated 10.9 years ago by ▴ 80 • written 10.9 years ago by ▴ 370
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
11.9 years ago Allegra Petti ▴ 120
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8
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3.1k
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methyAnalysis for DMR identification
convert methyAnalysis convert methyAnalysis
updated 11.9 years ago by ▴ 160 • written 11.9 years ago by ★ 13k
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6
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3.8k
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DMR identification: minfi speed, memory problems
Annotation convert minfi methyAnalysis bumphunter Annotation convert minfi methyAnalysis
updated 11.9 years ago by 68k • written 11.9 years ago by ★ 13k
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2.1k
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Conversion of minfi format MethylSet to methyAnalysis format MethyGenoSet
Cancer charm minfi methyAnalysis Cancer charm minfi methyAnalysis
12.9 years ago Ed Schwalbe ▴ 20
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1.7k
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genoset:::initGenoSet
methyAnalysis methyAnalysis
updated 12.9 years ago by ▴ 440 • written 12.9 years ago by ▴ 20
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2
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2.2k
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Loading Data into MethyAnalysis
Microarray methyAnalysis Microarray methyAnalysis
updated 13.0 years ago by ▴ 440 • written 13.0 years ago by ★ 13k
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1.4k
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methyAnalysis methyGenoSet function
methyAnalysis methyAnalysis
updated 13.0 years ago by 21k • written 13.0 years ago by ▴ 10
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1.5k
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importing data problem with methyAnalysis package
Biophysics Annotation Preprocessing annotate lumi methyAnalysis Biophysics Annotation lumi
13.0 years ago Pan Du ▴ 440
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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k
Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/
Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k
apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k
I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0
Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…
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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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