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package updates codetools deseq mgcv

updated 7.8 years ago by rodrigo_sengo • 0 • written 7.9 years ago by pbhamidipati • 0

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github package updates developers package development

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bioclite package installation package updates

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bioclite package updates

updated 7.9 years ago by Dan Tenenbaum ★ 8.2k • written 7.9 years ago by Jenny Drnevich ★ 2.0k

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rmarkdown package updates

updated 6.4 years ago by James W. MacDonald 62k • written 6.4 years ago by tarek.mohamed ▴ 10

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qvalue library software error package installation package updates

6.2 years ago tah340 • 0

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bioconductor biocgenerics ubuntu package updates r update

5.2 years ago siinemselvi • 0

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rmysql R version 3.1.2 3.1.2 package updates

8.2 years ago milorobertsmith • 0

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unable to update packages: foreign package updates

4.4 years ago shreyoshi.2311 • 0

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deprecate news package updates News

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package updates

7.7 years ago Cataphractus • 0

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package updates deprecate release News

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release bioconductor packages package updates News

4.8 years ago shepherl 3.4k

19 results • Page 1 of 1

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Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE by Hervé Pagès 16k

See https://github.com/Bioconductor/GenomeInfoDb/issues/82#issuecomment-1409482932

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE by Hervé Pagès 16k

See https://github.com/Bioconductor/GenomeInfoDb/issues/82#issuecomment-1409482932

Comment: Sva and batch effect by Gordon Smyth 47k

(+1). I find that ComBat tends to introduce spurious differential expression so, you think there's a batch effect affecting the variances a…

Comment: Advice for the analysis of microarray data with limma by Gordon Smyth 47k

You mean references on orthogonal polynomials? Polynomial approximation is a classic topic in mathematics and statistics and there are many…

Comment: Limma-voom with inverse probability weights (similar to sample weights) by Gordon Smyth 47k

The potential problem isn't with empirical Bayes with the fact that the variance estimate from your method A linear model might not be mean…

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Answer: Sva and batch effect

Answer: AnnotationForge::makeOrgPackage "argument is missing, with no default" Errors

Comment: Error in .order_seqlevels(chrom_sizes[, "chrom"]) : !anyNA(m32) is not TRUE

Answer: Limma-voom with inverse probability weights

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