Bioconductor CPM

6

votes

14

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2.9k

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rnaseq analysis variancestabilizingtransformation normalization cpm edger

updated 6.0 years ago by Wolfgang Huber ★ 13k • written 6.0 years ago by svlachavas ▴ 830

4

votes

11

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4.6k

views

edger independent filtering multiple factor design cpm

updated 6.6 years ago by Gordon Smyth 50k • written 6.6 years ago by teshome.dagnem • 0

3

votes

9

replies

1.8k

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CPM filterByExpr edgeR design model.matrix

13 months ago mohammedtoufiq91 ▴ 10

3

votes

9

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1.7k

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edger cpm

6.6 years ago jtremblay514 • 0

3

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8

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1.4k

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LRT CPM lowcountgenes deseq2

6.2 years ago A ▴ 40

2

votes

7

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5.3k

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cpm gene expression matrix tmm normailzation

7.2 years ago kkadzi25 • 0

5

votes

7

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1.2k

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filtering RNA-Seq CPM edgeR filterByExpr

updated 11 months ago by Gordon Smyth 50k • written 11 months ago by mohammedtoufiq91 ▴ 10

5

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7

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2.6k

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edger removeBatchEffect cpm logCPM limma

4.9 years ago altintas.ali • 0

2

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7

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1.6k

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RUVSeq CPM Normalization

23 months ago Jess • 0

2

votes

7

replies

2.4k

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edgeR DE analysis fold change cpm

updated 7.8 years ago by Ryan C. Thompson ★ 7.9k • written 7.8 years ago by Sara ▴ 10

15

votes

6

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29k

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edgeR cpm

updated 5.9 years ago by ftroot1010 ▴ 20 • written 6.1 years ago by jxb.dev ▴ 40

1

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6

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1.7k

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limma cpm

updated 7.9 years ago by José Luis Lavín ▴ 10 • written 8.2 years ago by map2085 ▴ 40

5

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6

replies

1.7k

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CPM filterByExpr edgeR histogram rowsums

17 months ago mohammedtoufiq91 ▴ 10

4

votes

5

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1.1k

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deseq2 vst pca cpm

4.2 years ago svlachavas ▴ 830

2

votes

4

replies

1.3k

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edger cpm non-specific filtering rnaseq

updated 5.8 years ago by Gordon Smyth 50k • written 5.8 years ago by svlachavas ▴ 830

5

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4

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7.5k

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edger cpm multiple factor design independent filtering

8.3 years ago dietahanson ▴ 30

0

votes

3

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3.5k

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CPM edgeR

9.0 years ago ycding ▴ 10

0

votes

3

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1.2k

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edgeR cpm edger fitted model explained variance

updated 6.3 years ago by Gordon Smyth 50k • written 6.3 years ago by alakatos ▴ 130

0

votes

3

replies

651

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RNA seq cpm

updated 4.1 years ago by Kevin Blighe ★ 3.9k • written 4.1 years ago by isabel.pieterse • 0

1

vote

3

replies

2.3k

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deseq2 rnaseq rna-seq normalization cpm

updated 8.0 years ago by Wolfgang Huber ★ 13k • written 8.0 years ago by stwestreich • 0

13

votes

3

replies

3.5k

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edger cpm

8.4 years ago mikaelhc ▴ 20

5

votes

3

replies

1.7k

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edgeR cpm voom limma

8.6 years ago Ryan C. Thompson ★ 7.9k

3

votes

2

replies

869

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diffbind CPM TMM

updated 4.1 years ago by Rory Stark ★ 5.2k • written 4.1 years ago by Guandong Shang ▴ 40

6

votes

2

replies

2.8k

views

edger cpm

updated 6.2 years ago by Aaron Lun ★ 28k • written 6.2 years ago by b.nota ▴ 360

3

votes

2

replies

999

views

edger limma cpm

updated 5.6 years ago by Aaron Lun ★ 28k • written 5.6 years ago by b.nota ▴ 360

1

vote

2

replies

808

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rlog CPM RKPM

updated 4.4 years ago by Steve Lianoglou ★ 13k • written 4.4 years ago by zhang.jianhai ▴ 10

1

vote

2

replies

2.1k

views

edger filtering cpm

updated 7.7 years ago by Gordon Smyth 50k • written 7.7 years ago by lynski008 • 0

0

votes

2

replies

3.3k

views

edger cpm rnaseq

3.7 years ago francesca3 • 0

1

vote

1

reply

947

views

DEGUST Normalization CPM

updated 2.7 years ago by James W. MacDonald 65k • written 2.7 years ago by Caroline • 0