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EnhancedVolcano
•
reset
0
votes
20
replies
3.1k
views
pointSize, labSize, and DrawConnectors error when plotting EnhancedVolcano
EnhancedVolcano
3.7 years ago • updated 3.3 years ago
knholm
• 0
1
vote
12
replies
1.7k
views
EnhancedVolcano - highlight specific points by changing shape
enhancedvolcano
updated 3.6 years ago by
Kevin Blighe
★ 3.9k • written 3.6 years ago by
n.tear
▴ 20
6
votes
9
replies
2.0k
views
How to better design a Volcano plot
EnhancedVolcano
updated 3.3 years ago by
Kevin Blighe
★ 3.9k • written 3.3 years ago by
suxxa
▴ 20
6
votes
8
replies
3.6k
views
Jitter p-values in volcano plot
EnhancedVolcano
DESeq2
updated 3.5 years ago by
Michael Love
41k • written 3.5 years ago by
philipp.rewe
▴ 20
1
vote
8
replies
3.3k
views
Problem selectively labelling points in the Enhanced Volcano package
EnhancedVolcano
3.3 years ago
Peter
▴ 10
7
votes
8
replies
6.4k
views
Warning in EnhancedVolcano plot
volcano-plot
EnhancedVolcano
updated 3.0 years ago by
Kevin Blighe
★ 3.9k • written 3.0 years ago by
Assa Yeroslaviz
★ 1.5k
0
votes
8
replies
12k
views
How to generate a volcano plot when p-values from DESeq2 are zero?
deseq2
pvalue
visualization
enhancedvolcano
rnaseq
updated 5.2 years ago by
Michael Love
41k • written 5.2 years ago by
ricardo3889
• 0
4
votes
7
replies
2.5k
views
visualize significant upregultaed genes and downregultaed genes with different colors (EnhancedVolcano)
enhancedvolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
gaom001
▴ 10
1
vote
7
replies
130
views
Math expression in shapeCustom legend in EnhancedVolcano
EnhancedVolcano
1 day ago • updated 4 hours ago
pl23
• 0
0
votes
6
replies
2.2k
views
How to change all text, including point labels to Arial?
EnhancedVolcano
updated 22 months ago by
James W. MacDonald
65k • written 22 months ago by
junli1988
• 0
2
votes
6
replies
3.9k
views
How can I use geom_label_repel with EnhancedVolcano?
ggrepel
RNASeq
R
EnhancedVolcano
2.8 years ago
Loren
▴ 10
1
vote
6
replies
22k
views
Log2FC data type error in EnhansedVolcano package
software error
enhancedvolcano
4.6 years ago
sauuyer
▴ 10
3
votes
5
replies
2.0k
views
Volcano plot - select additional gene
EnhancedVolcano
RNASeqR
R
volcanoplot
updated 3.5 years ago by
Kevin Blighe
★ 3.9k • written 3.5 years ago by
camillab.
▴ 10
4
votes
5
replies
1.6k
views
EnhancedVolcano - Unable to customize the length of Connectors to Gene Labels
Transcriptomics
EnhancedVolcano
updated 12 months ago by
Kevin Blighe
★ 3.9k • written 12 months ago by
Peter
▴ 20
0
votes
5
replies
1.3k
views
Italicise
EnhancedVolcano
updated 23 months ago by
Kevin Blighe
★ 3.9k • written 23 months ago by
Pau
• 0
0
votes
5
replies
1.8k
views
EnhancedVolcano plot - labels
EnhancedVolcano
updated 2.6 years ago by
Kevin Blighe
★ 3.9k • written 2.6 years ago by
Johannes
• 0
3
votes
5
replies
2.5k
views
Print EnhancedVolcano Plot as jpeg or similar in R Notebook
EnhancedVolcano
updated 23 months ago by
Kevin Blighe
★ 3.9k • written 23 months ago by
Bine
▴ 40
2
votes
4
replies
2.0k
views
EnhancedVolcano legendPosition error
EnhancedVolcano
updated 17 months ago by
elefth.pavlos
▴ 40 • written 17 months ago by
Allison
• 0
0
votes
4
replies
1.1k
views
enhanced volcano , different -log10pvalue of the same gene
EnhancedVolcano
RNASeqData
DifferentialExpression
11 months ago
ruba-mahmoud
• 0
1
vote
4
replies
3.9k
views
EnhancedVolcano plot with colCustom
EnhancedVolcano
3.0 years ago
Neeraja Vegesna
▴ 10
5
votes
4
replies
4.7k
views
ylim and xlim in Enhanced Volcano
DESeq2
EnhancedVolcano
Bioconductor
updated 2.7 years ago by
Kevin Blighe
★ 3.9k • written 2.7 years ago by
Rachel
• 0
1
vote
4
replies
1.6k
views
Issue with selectively labelling genes in the Enhanced Volcano package
EnhancedVolcano
updated 2.3 years ago by
Kevin Blighe
★ 3.9k • written 2.3 years ago by
Jonathan
▴ 10
0
votes
3
replies
844
views
Enhanced volcanoplots from DESeq2
EnhancedVolcano
updated 4.1 years ago by
Michael Love
41k • written 4.1 years ago by
rimss.khurana
• 0
1
vote
3
replies
1.5k
views
Enhancedvolcano labels superimposed on points
EnhancedVolcano
updated 2.3 years ago by
Kevin Blighe
★ 3.9k • written 2.3 years ago by
acharest
• 0
0
votes
3
replies
852
views
change a column within a DESeq results object
EnhancedVolcano
updated 22 months ago by
Guido Hooiveld
★ 3.9k • written 22 months ago by
Matt
• 0
2
votes
2
replies
988
views
Overlay points with EnhancedVolcano R
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
redafazazi
• 0
4
votes
2
replies
2.7k
views
enhancedVolcano: Why are only a few of my select labels showing up?
enha
EnhancedVolcano
3.5 years ago
noahhelton98
▴ 20
0
votes
2
replies
433
views
EnhancedVolcano with labels based on log2 Fold Change
EnhancedVolcano
written 4 months ago by
sara.jacobson
• 0
0
votes
2
replies
554
views
Only display positive FC on volcano plot
EnhancedVolcano
updated 14 months ago by
Kevin Blighe
★ 3.9k • written 14 months ago by
Tanner
• 0
0
votes
2
replies
1.5k
views
ERROR installing EnhancedVolcano in R4.1
EnhancedVolcano
updated 2.5 years ago by
Kevin Blighe
★ 3.9k • written 2.5 years ago by
Raj
• 0
0
votes
2
replies
939
views
Unable to over/ride colour scheme with custom key-value pairs
EnhancedVolcano
updated 18 months ago by
Kevin Blighe
★ 3.9k • written 18 months ago by
patrirodry85
• 0
0
votes
2
replies
856
views
Is it possible for the legend labels to be different from the Colcustom names?
EnhancedVolcano
enha
18 months ago
elefth.pavlos
▴ 40
1
vote
1
reply
1.1k
views
Issue with lengthConnectors in EnhancedVolcano
EnhancedVolcano
updated 4 months ago by
mohamad.hajo89
• 0 • written 2.3 years ago by
ikotlar
▴ 10
1
vote
1
reply
2.1k
views
Enhanced Volcano Plot Controlling Color Layers
EnhancedVolcano
3.0 years ago
dk0319
• 0
2
votes
1
reply
4.8k
views
EnhancedVolcano Label Question
RNASeq
EnhancedVolcano
DEGs
updated 2.8 years ago by
Kevin Blighe
★ 3.9k • written 2.8 years ago by
robledoj13
• 0
0
votes
1
reply
2.1k
views
Increase text size of axis labels in EnhancedVolcano
EnhancedVolcano
updated 3.7 years ago by
Kevin Blighe
★ 3.9k • written 3.7 years ago by
knholm
• 0
0
votes
1
reply
1.6k
views
Enhanced Volcano Error when drawing connectors
EnhancedVolcano
updated 19 months ago by
Kevin Blighe
★ 3.9k • written 19 months ago by
deena.maurer
• 0
0
votes
1
reply
487
views
Error in names(label_color[label_color == "organe"]) <- "lysosome" : 'names' attribute [1] must be the same length as the vector [0]
EnhancedVolcano
updated 12 months ago by
elefth.pavlos
▴ 40 • written 12 months ago by
Phương Thùy
• 0
0
votes
0
replies
696
views
EnhancedVolcano, coloring of a subset of labels
EnhancedVolcano
2.4 years ago
bradyb
• 0
0
votes
0
replies
849
views
Plotting Upregulated and down regulated genes in different colour
EnhancedVolcano
2.2 years ago
Somenath
• 0
0
votes
0
replies
460
views
MetaVolcanoR usage
limma
MetaVolcanoR
EnhancedVolcano
21 months ago
JAcky
• 0
41 results • Page
1 of 1
Recent ...
Replies
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Thank you very much - that worked perfectly! Word of warning to those who try this: it screws up the other legends because of the markdown …
Answer: PCA plot suggestions
by
Michael Love
41k
For help with interpretation and design of analysis, I recommend working with a local statistician. Due to time restrictions, I can only…
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
by
ussarizona
▴ 10
Hi Michael, Yes, I could figure it out what does the error mean. In my matrix I had the first colum GeneID while in my condition I only h…
Answer: Deseq2. decontXcounts not integers. Useful alternative?
by
Michael Love
41k
Another option would be to put the per sample estimated contamination in the design. This is for example how RUV etc help remove spurious D…
Answer: ATACseq merge peaks
by
ATpoint
★ 4.0k
That depends on your analysis. Typically, for differential analysis (and convenience) you would produce a single set of peaks (e.g. by merg…
Votes
Answer: Math expression in shapeCustom legend in EnhancedVolcano
Comment: DESeq2 Error in `.rowNamesDF<-`(x, value = value): Invalid 'row.names' length
Comment: Deseq2. decontXcounts not integers. Useful alternative?
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
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3.8k
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