Bioconductor Splicing

Showing : Splicing • reset

votes

562

views

splicing limma edgeR

updated 8 months ago by Gordon Smyth 51k • written 8 months ago by scoops_streams_06 • 0

votes

683

views

transcriptome splicing assembly

updated 2.0 years ago by James W. MacDonald 67k • written 2.0 years ago by Marianna ▴ 20

votes

1.1k

views

splicing Exon featureCounts subread DEXSeq

2.5 years ago NIK • 0

votes

replies

842

views

psichomics SUPPA Splicing Alternative Splicing Retained Introns

4.1 years ago noahhelton98 ▴ 20

votes

replies

2.8k

views

edger normalization differential exon usage splicing

updated 4.1 years ago by Yunshun Chen ▴ 890 • written 4.1 years ago by oakhamwolf • 0

votes

replies

1.3k

views

DEXSeq Splicing Exon Usage

4.8 years ago gunjan.dikshit • 0

votes

1.3k

views

ciri splicing splicesites

updated 4.8 years ago by lhddiallo • 0 • written 6.5 years ago by csijst • 0

votes

982

views

junctionseq splicing RNAseq DEXSeq

5.0 years ago stuart ▴ 10

vote

replies

1.7k

views

genomicalignments splicing coverage

updated 5.1 years ago by Michael Lawrence ★ 11k • written 7.6 years ago by rasi1983 ▴ 10

votes

1.1k

views

dexseq splicing sqtl qtl

updated 5.8 years ago by Alejandro Reyes ★ 1.9k • written 5.8 years ago by rtunney2 • 0

votes

replies

2.0k

views

deseq2 splicing

updated 6.6 years ago by Michael Love 43k • written 6.6 years ago by yannickwurm • 0

vote

replies

1.7k

views

DRIMSeq splicing differential isoform usage

updated 7.8 years ago by Gosia Nowicka ▴ 90 • written 7.8 years ago by kristoffer.vittingseerup ▴ 20

votes

replies

3.0k

views

sgseq splicing alternative splicing

updated 8.7 years ago by Leonard Goldstein ▴ 260 • written 8.7 years ago by vakul.mohanty ▴ 20

vote

replies

1.9k

views

microarray splicing

updated 8.8 years ago by Sonika Tyagi ▴ 20 • written 10.1 years ago by gv ▴ 40

votes

replies

1.6k

views

DEXSeq splicing python SAM

9.1 years ago Fiona ▴ 70

vote

replies

2.4k

views

SGSeq analyzeFeatures Splicing

9.9 years ago Paolo Guarnieri ▴ 20

16 results • Page 1 of 1

Recent ...

Replies

Answer: Deseq2 res Function by Michael Love 43k

> Does this mean the young and KO groups were numerators and denominators in the analysis, respectively? Read over the vignette and work…

Answer: ANOVA like approach of edgeR by Gordon Smyth 51k

You need to clarify whether interactions are present for the two factors in your study. In the two factors do not interact, then the code y…

Answer: Create Illmina bead summary data by Gordon Smyth 51k

GenomeStudio produces IDAT files that you can read using the `read.idat` function in limma. That is the recommended way to read GenomeStudi…

Comment: Help with RSEM counts: do I transpose matrix? by NB • 0

OK thank you.

Comment: Help with RSEM counts: do I transpose matrix? by James W. MacDonald 67k

You can ask here, but please read the `DESeq2` vignette first, which should answer most questions.

Votes

Answer: Deseq2 res Function

Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification

Answer: ANOVA like approach of edgeR

Comment: ANOVA like approach of edgeR

Awards • All