Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Subsetting
•
reset
4
votes
2
replies
1.5k
views
drop levels in eSet pData
subsetting
eSet
8.2 years ago
Shamim Sarhadi
▴ 20
4
votes
7
replies
4.5k
views
removing rows from SingleCellExperiment container
sce
singlecellexperiment
scRNAseq
subsetting
updated 5.3 years ago by
Aaron Lun
★ 28k • written 5.3 years ago by
TJ
• 0
4
votes
3
replies
3.9k
views
subsetting GRanges object based on gene IDs
genomicranges
genomicfeatures
granges
subsetting
6.7 years ago
Assa Yeroslaviz
★ 1.5k
4
votes
4
replies
1.7k
views
Limma Elist subsetting
microarray
limma
subsetting
7.9 years ago
arfranco
▴ 130
3
votes
2
replies
1.3k
views
Get a complete view of a long DNA sequence of a Biostrings object in R
biostrings
subsetting
View
dnastring
dnaseq
updated 8.7 years ago by
James W. MacDonald
65k • written 8.7 years ago by
arado1
• 0
3
votes
4
replies
6.1k
views
Subset GRanges object into new object
R
genomicranges
subsetting
6.5 years ago
jhanks1981
• 0
3
votes
7
replies
6.6k
views
edgeR subsetting DGEList by column/sample
edger
subsetting
dgelist
updated 7.8 years ago by
Gordon Smyth
50k • written 7.8 years ago by
mnaymik
▴ 10
2
votes
1
reply
1.2k
views
naiveRandRUV Error When k is 1
RUVNormalize
Subsetting
updated 8.8 years ago by
laurent.jacob
▴ 10 • written 8.9 years ago by
Dario Strbenac
★ 1.5k
2
votes
5
replies
1.7k
views
rlog, lfcShrink and vst on gene subset
deseq2
subsetting
plot
updated 5.9 years ago by
Michael Love
41k • written 5.9 years ago by
giulia.pasquesi
▴ 10
1
vote
2
replies
1.3k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 6.5 years ago by
Axel Klenk
★ 1.0k • written 6.5 years ago by
A
▴ 40
1
vote
1
reply
971
views
Subsetting GRanges objext
GRanges
subsetting
updated 5.7 years ago by
James W. MacDonald
65k • written 5.7 years ago by
lalchungnungabt17
• 0
1
vote
2
replies
1.4k
views
object of type 'externalptr' is not subsettable in R4.0 - with COM Object
r4.0
ComponentObjectModel
subsetting
18 months ago • updated 17 months ago
Duy Duc
• 0
1
vote
2
replies
2.0k
views
Subsetting GRanges based on metadata
GRanges
metadata
subsetting
updated 7.7 years ago by
Michael Lawrence
★ 11k • written 7.7 years ago by
mdeea123
▴ 10
1
vote
2
replies
963
views
VariantAnnotation CollapsedVCF trouble
variantannotation
subsetting
7.6 years ago
Fabian Grammes
▴ 20
0
votes
5
replies
2.6k
views
Grange object subsetting using seqnames
Seqnames
makeGRangesFromDataFrame
GRanges
Subsetting
GenomicRanges
2.8 years ago
rtrivedi1
▴ 10
0
votes
1
reply
1.3k
views
Inconsistent Subseting using norm2Filter in FlowCore
flowcore
gate
subsetting
filter
updated 8.6 years ago by
Jiang, Mike
★ 1.3k • written 8.6 years ago by
peterfoster
▴ 20
0
votes
1
reply
1.2k
views
HTqPCR: bug in subsetting qPCRset
HTqPCR
htqpcr
subsetting
updated 7.3 years ago by
henrik.seidel
▴ 40 • written 7.5 years ago by
Guido Hooiveld
★ 3.9k
0
votes
0
replies
937
views
Subsetting and Transforming
subsetting
gate
flowcore
updated 7.3 years ago by
Martin Morgan
25k • written 7.3 years ago by
smajor
• 0
0
votes
1
reply
2.0k
views
Subsetting/subsequencing AAStringSet containing sequences of unequal length
biostrings
aastringset
subsetting
updated 7.0 years ago by
Hervé Pagès
16k • written 7.0 years ago by
bri.isabella
• 0
0
votes
2
replies
1.2k
views
DataFrame matrix subsetting
DataFrame
subsetting
S4Vectors
updated 5.3 years ago by
Hervé Pagès
16k • written 5.3 years ago by
felix.ernst
• 0
20 results • Page
1 of 1
Recent ...
Replies
Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
Awards
• All
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Zainab
• 0
Popular Question
to
Theo
▴ 10
Popular Question
to
gene_bioconductor
▴ 10
Popular Question
to
rohitsatyam102
▴ 20
Locations
• All
Sweden,
3 minutes ago
France,
12 minutes ago
EMBL Heidelberg,
29 minutes ago
The city by the bay,
56 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
Traffic: 535 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6