Bioconductor TMM

7

votes

12

replies

4.8k

views

EdgeR normalization fastq txt TMM

updated 24 months ago by Gordon Smyth 50k • written 8.5 years ago by hamidrezarazzaghian • 0

6

votes

7

replies

1.9k

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TMM deseq2 smallrna rnaseq

updated 5.4 years ago by António Miguel de Jesus Domingues ▴ 510 • written 5.4 years ago by Konstantinos Yeles ▴ 80

6

votes

4

replies

3.2k

views

edgeR tmm normalization counts

updated 7.0 years ago by James W. MacDonald 65k • written 7.0 years ago by jol.espinoz ▴ 40

5

votes

2

replies

680

views

TMM limma

10 months ago • updated 9 months ago Nisha • 0

5

votes

6

replies

2.0k

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regionCounts TMM csaw

7.9 years ago saadmurtazakhan ▴ 10

5

votes

4

replies

3.2k

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TMM normalization edgeR

updated 7.6 years ago by James W. MacDonald 65k • written 7.6 years ago by Sara ▴ 10

4

votes

1

reply

4.7k

views

edgr tmm normalization

updated 8.5 years ago by Aaron Lun ★ 28k • written 8.5 years ago by Assa Yeroslaviz ★ 1.5k

4

votes

3

replies

2.8k

views

matlab calcnormfactors TMM edgeR

updated 8.9 years ago by Gordon Smyth 50k • written 8.9 years ago by katherine.beaulieu14 • 0

3

votes

2

replies

866

views

diffbind CPM TMM

updated 4.1 years ago by Rory Stark ★ 5.2k • written 4.1 years ago by Guandong Shang ▴ 40

3

votes

7

replies

5.8k

views

limma edger plotmds tmm masigpro

6.4 years ago dacaba.92 ▴ 10

3

votes

1

reply

1.6k

views

csaw TMM

4.7 years ago ATpoint ★ 4.1k

2

votes

1

reply

1.6k

views

DESeq2 tximport Kallisto TMM edgeR

updated 2.5 years ago by Michael Love 41k • written 2.5 years ago by BioNovice247 • 0

2

votes

5

replies

11k

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rnaseq normalization tpm tmm

8.6 years ago nickbern92 • 0

2

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2

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1.3k

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TMM edgeR

7.9 years ago humberto_munoz • 0

2

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7

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5.3k

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cpm gene expression matrix tmm normailzation

7.2 years ago kkadzi25 • 0

2

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3

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2.5k

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differential expression TMM normalization rnaseq edger

7.1 years ago aec ▴ 90

1

vote

4

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1.1k

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TMM edgeR qsea MEDIPS

updated 19 months ago by Simon Pearce • 0 • written 19 months ago by a.riediger ▴ 20

1

vote

1

reply

832

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RNASeq Normalization TMM edgeR

updated 21 months ago by Gordon Smyth 50k • written 21 months ago by e.g.w.miller ▴ 10

1

vote

1

reply

760

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edgeR SequencingData miRNA TMM Normalization

updated 14 months ago by Gordon Smyth 50k • written 14 months ago by tleona3 • 0

1

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4

replies

2.1k

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salmon tximport gene length eqtl TMM

updated 6.0 years ago by Michael Love 41k • written 6.0 years ago by VSM ▴ 120

1

vote

1

reply

877

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limma TMM differential expression normalization rnaseq

updated 5.1 years ago by James W. MacDonald 65k • written 5.1 years ago by natalia_lt • 0

1

vote

2

replies

1.2k

views

csaw edger tmm chipseq

updated 2.1 years ago by Rory Stark ★ 5.2k • written 2.1 years ago by maria.soler • 0

1

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4

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1.7k

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edger TMM DEG normalization

updated 5.3 years ago by Gordon Smyth 50k • written 5.3 years ago by rproendo ▴ 20

1

vote

18

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3.2k

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chip-seq TSS TMM csaw

updated 7.9 years ago by Aaron Lun ★ 28k • written 7.9 years ago by saadmurtazakhan ▴ 10

0

votes

1

reply

1.9k

views

Rory Stark diffbind TMM edgeR chipseq

updated 7.8 years ago by Rory Stark ★ 5.2k • written 8.0 years ago by akdess • 0

0

votes

1

reply

1.1k

views

normalization quantile normalization tmm edger

updated 6.2 years ago by Gordon Smyth 50k • written 6.2 years ago by bilcodygm • 0

0

votes

3

replies

1.9k

views

diffbind chip-seq normalization deseq2 tmm

updated 7.3 years ago by Rory Stark ★ 5.2k • written 7.3 years ago by siklenkak • 0

0

votes

2

replies

935

views

edgeR DifferentialExpression TMM RNASeq

updated 2.6 years ago by Gordon Smyth 50k • written 2.6 years ago by hamidrezarazzaghian • 0