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correlation
•
reset
0
votes
2
replies
330
views
QSEA- Extraction of Normalized methylation across the samples
qsea
ngsReports
correlation
written 5 months ago by
Researcher
• 0
0
votes
1
reply
1.1k
views
Human genes correlation to Bacterial genes
correlation
pearsoncorrelation
rna-seq
differential gene expression
updated 10 months ago by
ATpoint
★ 4.5k • written 6.6 years ago by
saad_k6
• 0
0
votes
2
replies
1.5k
views
using WGCNA, positive or negative corrlation between genes composing modules.
correlation
wgcna
network
updated 5 months ago by
mariakenneth147
• 0 • written 23 months ago by
pharamac
• 0
0
votes
1
reply
1.2k
views
WGCNA correlation sign differences between eigen genes/ hub genes and clinical traits
hub
correlation
eigen
WGCNA
updated 11 months ago by
Vanatta
• 0 • written 2.9 years ago by
mairah.khan
• 0
0
votes
1
reply
1.1k
views
Correlation between two different datasets: between results of RNAseq and absence/presence of Type3 Secretion System
RNASeq
Correlation
DESeq2
updated 2.2 years ago by
Michael Love
42k • written 2.2 years ago by
keshav.prasad.gubbi
• 0
1
vote
1
reply
1.2k
views
spearman correlation
correlation
sperarman
updated 3.1 years ago by
ATpoint
★ 4.5k • written 3.1 years ago by
info@shi
• 0
15
votes
17
replies
25k
views
WGCNA: What is `soft thresholding`?
wgcna
network analysis
network
correlation
coexpression
updated 3.9 years ago by
Lluís Revilla Sancho
▴ 760 • written 8.2 years ago by
jol.espinoz
▴ 40
5
votes
1
reply
1.9k
views
Best practice for correlating scRNA seq to bulkRNA seq data
seurat
edgeR
spearman
correlation
scRNAseq
updated 4.5 years ago by
Aaron Lun
★ 28k • written 4.5 years ago by
tobias-messmer
▴ 20
0
votes
2
replies
1.1k
views
Correlation plot how to improve?
plot
correlation
5.0 years ago
annkolman78
• 0
4
votes
7
replies
1.5k
views
Are spurious correlations possible in correlating two DESeq2 foldchanges computed using the same reference sample group?
deseq2
correlation
6.0 years ago
Cornwell, Adam
▴ 110
0
votes
3
replies
1.4k
views
Coverage profile comparison
Targeted sequencing
correlation
coverage
euclid
clustering
6.1 years ago
faramer86
• 0
0
votes
1
reply
1.2k
views
How can I do a correlation heatmap between two groups of matrices (metabolomic and transcriptomic data)
correlation
6.4 years ago
adriana.gallego.02
▴ 20
0
votes
1
reply
1.3k
views
Differential Coexpression Analysis
differential analysis
differential gene expression
coexpression
correlation
updated 6.7 years ago by
Peter Langfelder
★ 3.0k • written 6.7 years ago by
hkarakurt
▴ 20
2
votes
1
reply
962
views
Is there any prerequisites for taking correlation in genomic data?
correlation
updated 6.7 years ago by
chris86
▴ 420 • written 6.7 years ago by
Arman Shahrisa
▴ 20
0
votes
6
replies
1.7k
views
expression correlation on an ExpressionSet
ExpressionSet
caseControl
Correlation
Plot
updated 7.5 years ago by
vulegom
• 0 • written 7.8 years ago by
DataFanatic
▴ 10
1
vote
2
replies
2.2k
views
Diffbind: how to include all the samples in the heatmap while using the contrast
diffbind
heatmap
correlation
updated 7.6 years ago by
Rory Stark
★ 5.2k • written 7.6 years ago by
a.bahraini88
• 0
7
votes
3
replies
3.5k
views
plotting correlation between samples
correlation
updated 7.7 years ago by
Aaron Lun
★ 28k • written 7.7 years ago by
teresati
▴ 10
4
votes
9
replies
3.7k
views
WGCNA | pickSoftThreshold.fromSimilarity not working for input similarity matrix
WGCNA
similarity
correlation
bioconductor
rnaseq
updated 7.8 years ago by
Peter Langfelder
★ 3.0k • written 7.8 years ago by
jol.espinoz
▴ 40
4
votes
4
replies
1.6k
views
Correlation analysis taking into account multiple correlations
edger
rna-seq
correlation
updated 8.1 years ago by
Andrew_McDavid
▴ 270 • written 8.1 years ago by
jhj89
▴ 10
2
votes
7
replies
5.0k
views
How to create "trait data" file for WGCNA
wgcna
coexpression
correlation
microarray
updated 8.7 years ago by
Peter Langfelder
★ 3.0k • written 8.7 years ago by
shalinisonar13
▴ 20
2
votes
4
replies
2.5k
views
Can DESeq correlate genes expression patterns with a numerical sample factor?
deseq2
correlation
deseq
linear
updated 9.2 years ago by
Ryan C. Thompson
★ 7.9k • written 9.2 years ago by
matt.arno
• 0
3
votes
3
replies
1.6k
views
Correlation/clustering of numeric (continuous) and categorical values
correlation
updated 9.6 years ago by
Sean Davis
21k • written 9.6 years ago by
Johannes Rainer
★ 2.1k
22 results • Page
1 of 1
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Comment: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
by
Ai
• 0
Hi Gordon, Thank you so much for answering my question and confirming that this is expected! I will go ahead note this down. Sincerely, …
Answer: Annotation for EPICv2
by
icecreamlover
• 0
Hello, I am also working on analyzing my data from EPICv2 using ChAMP. I used this resource as a guide: https://github.com/YuanTian1991/ChA…
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
James W. MacDonald
67k
And it doesn't matter if you're doing gene set analyses after, if the statistics are questionable to begin with.
Comment: Combining RNAseq and microarray data using edgeR/limma-voom
by
James W. MacDonald
67k
If you're saying that (as an example) you have treated and control in both assay types, and you want to combine and make comparisons betwee…
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db?
by
Guido Hooiveld
★ 4.1k
I have contacted NCBI, and meanwhile got an an answer. See below. It turns out that the official, HGNC-approved symbols are present in the…
Votes
Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
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Answer: DecideTest vs topTAGs in edgeR
Comment: DESeq Input from Salmon + tximport/tximeta
Comment: DESeq Input from Salmon + tximport/tximeta
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